Pre_GI: BLASTP Hits

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Query: NC_004547:2810151:2834311 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 2834311, End: 2834895, Length: 585

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011415:2153243:217516521751652175737573Escherichia coli SE11 chromosome, complete genomehypothetical protein6e-58223
NC_008258:1934479:195988919598891960455567Shigella flexneri 5 str. 8401, complete genomehypothetical protein8e-58223
NC_008800:2592500:259261925926192593179561Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein4e-56217
NC_010159:2546590:254758625475862548161576Yersinia pestis Angola, complete genomehypothetical protein3e-54211
NC_003143:2309500:232544623254462326021576Yersinia pestis CO92, complete genomehypothetical protein3e-54211
NC_010465:2383219:238537923853792385954576Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF9913e-54211
NC_008150:1593500:160975916097591610334576Yersinia pestis Antiqua, complete genomehypothetical protein3e-54211
NC_004088:2491303:249346324934632494038576Yersinia pestis KIM, complete genomehypothetical protein3e-54211
NC_010634:2297000:231230923123092312884576Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-54211
NC_006155:2378526:239441323944132394988576Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-54211
NC_008149:1718000:173405817340581734633576Yersinia pestis Nepal516, complete genomehypothetical protein3e-54211
NC_005810:2091930:210784521078452108420576Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-54211
NC_009381:1205900:120806012080601208635576Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-54211
NC_009708:2347350:234834623483462348921576Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-54211
NC_014029:2285323:228748322874832288058576Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-54211
NC_017154:2306421:232235023223502322925576Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-54211
NC_017160:2212806:221496622149662215541576Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-54211
NC_017168:3433804:343596434359643436539576Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-54211
NC_017265:2213500:221517022151702215745576Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative metal-binding enzyme3e-54211
NC_014562:1772842:178801617880161788579564Pantoea vagans C9-1 chromosome, complete genomeProtein yecM9e-52202