Pre_GI: BLASTP Hits

Some Help

Query: NC_004547:1174650:1201077 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1201077, End: 1201706, Length: 630

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:2809591:282070828207082821328621Pseudomonas putida KT2440, complete genomeglutathione S-transferase family protein4e-70264
NC_014623:6509000:651304065130406513711672Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglutathione s-transferase family protein1e-34146
NC_008782:1863853:186851418685141869212699Acidovorax sp. JS42, complete genomeGlutathione S-transferase, N-terminal domain4e-31134
NC_020181:3585898:360376236037623604430669Enterobacter aerogenes EA1509E, complete genomeGlutathione S-transferase1e-28125
NC_011094:4361238:439569143956914396359669Salmonella enterica subsp. enterica serovar Schwarzengrund strglutathione S-transferase, N- domain2e-28125
NC_006905:4405301:443974844397484440416669Salmonella enterica subsp. enterica serovar Choleraesuis strputative glutathione S-transferase2e-28125
NC_007645:6407370:642151364215136422241729Hahella chejuensis KCTC 2396, complete genomeGlutathione S-transferase2e-28125
NC_015381:3091500:309702030970203097688669Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein6e-27120
NC_016745:123772:136818136818137495678Oceanimonas sp. GK1 chromosome, complete genomeglutathione S-transferase domain-containing protein3e-25115
NC_014623:9492000:951222595122259512827603Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglutathione s-transferase5e-23107
NC_010067:3310336:331596133159613316625665Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-2099.8
NC_014623:723089:731093731093731701609Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglutathione s-transferase2e-1995.5
NC_011144:1264871:128569312856931286328636Phenylobacterium zucineum HLK1, complete genomeglutathione S-transferase5e-1580.9
NC_015593:203000:228480228480229112633Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeglutathione S-transferase domain-containing protein8e-1580.5
NC_010162:10764788:107723141077231410772946633Sorangium cellulosum 'So ce 56', complete genomeglutathione S-transferase2e-1479
NC_011740:1595381:159998715999871600583597Escherichia fergusonii ATCC 35469, complete genomeputative Glutathione S-transferase family protein1e-1272.8
NC_007516:1618033:162247116224711623034564Synechococcus sp. CC9605, complete genomeputative glutathione S-transferase2e-1272.8
NC_010162:7571525:759098575909857591608624Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-1271.6
NC_007802:1093785:111033911103391110998660Jannaschia sp. CCS1, complete genomeglutathione S-transferase-like6e-1270.9
NC_015856:2488297:249016224901622490794633Collimonas fungivorans Ter331 chromosome, complete genomeglutathione S-transferase5e-1270.9
NC_010475:2896000:290162829016282902188561Synechococcus sp. PCC 7002, complete genomeglutathione S-transferase5e-1167.8
NC_020064:1501441:150593715059371506641705Serratia marcescens FGI94, complete genomeglutathione S-transferase3e-1065.5
NC_016612:3314846:331807233180723318698627Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative glutathione S-transferase6e-1064.3
NC_011283:2627050:264887126488712649476606Klebsiella pneumoniae 342 chromosome, complete genomeglutathione S-transferase9e-1063.5
NC_013850:2624899:264576726457672646381615Klebsiella variicola At-22 chromosome, complete genomeGlutathione S-transferase domain protein9e-1063.5
NC_010552:293703:299203299203299862660Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceGlutathione S-transferase domain1e-0962.8
NC_008391:1768456:178667717866771787300624Burkholderia cepacia AMMD chromosome 2, complete sequenceGlutathione S-transferase, N-terminal domain2e-0962.8
NC_014623:9038177:905065290506529051323672Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglutathione s-transferase domain-containing protein2e-0962.4
NC_010552:2541100:255804325580432558666624Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceGlutathione S-transferase domain4e-0961.6
NC_009832:1664238:166811016681101668817708Serratia proteamaculans 568, complete genomeGlutathione S-transferase domain9e-0960.5
NC_008782:4229306:423280342328034233501699Acidovorax sp. JS42, complete genomeGlutathione S-transferase, N-terminal domain8e-0960.5
NC_014664:1669642:168575816857581686453696Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeGlutathione S-transferase domain protein9e-0960.1
NC_008391:2253188:225720822572082257867660Burkholderia cepacia AMMD chromosome 2, complete sequenceGlutathione S-transferase, N-terminal domain1e-0859.7
NC_007510:1959883:201738720173872018034648Burkholderia sp. 383 chromosome 1, complete sequenceGlutathione S-transferase-like1e-0859.7
NC_014323:5219154:524037852403785241001624Herbaspirillum seropedicae SmR1 chromosome, complete genomeglutathione S-transferase2e-0858.9
NC_014623:5350116:536082653608265361479654Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglutathione s-transferase2e-0858.9
NC_011094:973140:987757987757988383627Salmonella enterica subsp. enterica serovar Schwarzengrund strglutathione S-transferase family protein3e-0858.9
NC_010170:1551923:156812915681291568749621Bordetella petrii, complete genomeputative glutathione transferase3e-0858.5
NC_015563:4093650:409908240990824099714633Delftia sp. Cs1-4 chromosome, complete genomeglutathione S-transferase domain-containing protein4e-0858.2
NC_002928:1351750:137186713718671372517651Bordetella parapertussis 12822, complete genomeputative glutatione S-transferase4e-0858.2
NC_020064:3825916:382685138268513827489639Serratia marcescens FGI94, complete genomeglutathione S-transferase5e-0857.8
NC_010501:1286971:130797513079751308598624Pseudomonas putida W619, complete genomeGlutathione S-transferase domain7e-0857.4
NC_011274:896802:911426911426912052627Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91glutathione s-transferase family protein7e-0857.4
NC_011294:878896:893519893519894145627Salmonella enterica subsp. enterica serovar Enteritidis strglutathione s-transferase family protein7e-0857.4
NC_016831:2108557:211303221130322113658627Salmonella enterica subsp. enterica serovar Gallinarum/pullorumglutathione s-transferase family protein7e-0857.4
NC_003197:920000:934627934627935253627Salmonella typhimurium LT2, complete genomeputative glutathione S-transferase7e-0857.4
NC_011083:967260:981894981894982520627Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,glutathione S-transferase family protein7e-0857.4
NC_016810:919266:933888933888934514627Salmonella enterica subsp. enterica serovar Typhimurium strglutathione s-transferase family protein7e-0857.4
NC_016856:921057:935679935679936305627Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative glutathione S-transferase7e-0857.4
NC_012125:894955:909578909578910204627Salmonella enterica subsp. enterica serovar Paratyphi C strainglutathione s-transferase family protein6e-0857.4
NC_006905:946418:962374962374963000627Salmonella enterica subsp. enterica serovar Choleraesuis strputative glutathione S-transferase6e-0857.4
NC_017046:919249:933870933870934496627Salmonella enterica subsp. enterica serovar Typhimurium str. 798glutathione s-transferase family protein7e-0857.4
NC_016863:920346:934968934968935594627Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative glutathione S-transferase7e-0857.4
NC_016860:959609:974231974231974857627Salmonella enterica subsp. enterica serovar Typhimurium strputative glutathione S-transferase7e-0857.4
NC_016857:919266:933888933888934514627Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74glutathione s-transferase family protein7e-0857.4
NC_007912:4364215:436811643681164368772657Saccharophagus degradans 2-40, complete genomeputative glutathione S-transferase9e-0857
NC_007912:4364215:437041643704164371060645Saccharophagus degradans 2-40, complete genomeglutathione S-transferase family protein1e-0757
NC_008313:1956500:196483919648391965534696Ralstonia eutropha H16 chromosome 1, complete sequenceGlutathione S-transferase1e-0756.6
NC_011205:944125:958763958763959389627Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853glutathione S-transferase1e-0756.6
NC_010170:3908500:393866839386683939300633Bordetella petrii, complete genomeglutathione S-transferase family protein1e-0756.6
NC_009138:1974935:197581619758161976457642Herminiimonas arsenicoxydans, complete genomeputative glutathione S-transferase enzyme with thioredoxin-like domain2e-0756.2
NC_010102:2178594:218306821830682183694627Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0755.8
NC_012791:721813:722888722888723499612Variovorax paradoxus S110 chromosome 1, complete genomeGlutathione S-transferase domain protein3e-0755.5
NC_009659:1050532:109396510939651094663699Janthinobacterium sp. Marseille chromosome, complete genomeglutathione S-transferase3e-0755.5
NC_008254:2728693:272995827299582730569612Mesorhizobium sp. BNC1, complete genomeglutathione S-transferase-like2e-0755.5
NC_009720:3281000:329687432968743297578705Xanthobacter autotrophicus Py2, complete genomeglutathione S-transferase domain-containing protein2e-0755.5
NC_011080:924326:938960938960939586627Salmonella enterica subsp. enterica serovar Newport str. SL254,glutathione S-transferase family protein3e-0755.1
NC_005139:1784000:187086118708611871544684Vibrio vulnificus YJ016 chromosome I, complete sequenceglutathione S-transferase3e-0755.1
NC_002929:52500:737067370674326621Bordetella pertussis Tohama I, complete genomeprobable glutathione S-transferase4e-0754.7
NC_017223:51180:737067370674326621Bordetella pertussis CS chromosome, complete genomeglutathione S-transferase4e-0754.7
NC_002927:506183:533184533184533804621Bordetella bronchiseptica RB50, complete genomeprobable glutathione S-transferase9e-0753.5
NC_010170:4739925:476091647609164761599684Bordetella petrii, complete genomehypothetical protein1e-0653.5
NC_018691:359695:365014365014365646633Alcanivorax dieselolei B5 chromosome, complete genomeGlutathione S-transferase domain protein2e-0652.4
NC_002928:507749:531831531831532451621Bordetella parapertussis 12822, complete genomeprobable glutathione S-transferase3e-0652
NC_008781:2611702:261549326154932616098606Polaromonas naphthalenivorans CJ2, complete genomeGlutathione S-transferase, C-terminal domain3e-0651.6
NC_010505:4990472:499259449925944993211618Methylobacterium radiotolerans JCM 2831, complete genomeGlutathione S-transferase domain protein4e-0651.2
NC_011071:4000620:400659140065914007232642Stenotrophomonas maltophilia R551-3, complete genomeGlutathione S-transferase domain8e-0650.4