Pre_GI: BLASTP Hits

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Query: NC_004547:1062410:1069781 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1069781, End: 1070074, Length: 294

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:3982383:400087640008764001169294Dickeya dadantii Ech703, complete genomeProtein of unknown function DUF17788e-41165
NC_012912:4012112:402458740245874024880294Dickeya zeae Ech1591, complete genomeProtein of unknown function DUF17781e-40164
NC_014500:564864:587253587253587546294Dickeya dadantii 3937 chromosome, complete genomeputative helix-turn-helix protein, copG family3e-39160
NC_016831:4367000:437743043774304377723294Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-39159
NC_016810:4573172:458314045831404583433294Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-39159
NC_011294:4409137:441938144193814419674294Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-39159
NC_011274:4385039:439728543972854397578294Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-39159
NC_011147:4297513:430952143095214309814294Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-39159
NC_003197:4551880:456256045625604562853294Salmonella typhimurium LT2, complete genomehypothetical protein5e-39159
NC_016856:4563435:457539045753904575683294Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein5e-39159
NC_016857:4573173:458314145831414583434294Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein5e-39159
NC_016860:4649274:465995446599544660247294Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-39159
NC_016863:4513106:452299645229964523289294Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein5e-39159
NC_017046:4571833:458180145818014582094294Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-39159
NC_003198:4397074:440703344070334407326294Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-39159
NC_004631:4381724:439168343916834391976294Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-39159
NC_016832:4368948:437890743789074379200294Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-39159
NC_011080:4543000:455299445529944553287294Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-38157
NC_011205:4564645:457660045766004576893294Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-38157
NC_016845:4539381:456140045614004561693294Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative CopG family helix-turn-helix protein1e-38157
NC_011094:4442478:445247044524704452763294Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-38156
NC_014500:564864:581656581656581949294Dickeya dadantii 3937 chromosome, complete genomeputative helix-turn-helix protein, copG family6e-38155
NC_004631:4494000:451303045130304513323294Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-36149
NC_003198:4513900:453022145302214530514294Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-36149
NC_013716:3708415:372185737218573722150294Citrobacter rodentium ICC168, complete genomehypothetical protein3e-35146
NC_010688:1192410:124273212427321243022291Xanthomonas campestris pv. campestris, complete genomeputative DNA-binding protein4e-28123
NC_007086:1224867:126814712681471268437291Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein4e-28123
NC_003902:3666544:367842936784293678719291Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein4e-28123
NC_017271:3641705:365594136559413656231291Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein5e-28122
NC_012721:1686450:169357516935751693856282Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein2e-1994.4
NC_014228:4408500:442126144212614421539279Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-1993.2
NC_015186:347346:354738354738355040303Acidiphilium multivorum AIU301, complete genomehypothetical protein4e-1683.6
NC_009484:318500:322246322246322575330Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein4e-1683.2
NC_012880:3529017:354971135497113549935225Dickeya dadantii Ech703, complete genomehypothetical protein6e-1682.8
NC_010998:111052:130559130559130816258Rhizobium etli CIAT 652 plasmid pA, complete sequencehypothetical protein1e-1478.2
NC_015942:2060349:206248120624812062753273Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein4e-1063.5
NC_010725:1419272:146705814670581467396339Methylobacterium populi BJ001, complete genomeProtein of unknown function DUF17781e-0755.1
NC_014365:2888897:289193228919322892216285Desulfarculus baarsii DSM 2075 chromosome, complete genomeProtein of unknown function DUF17781e-0755.1
NC_009720:900884:913634913634913933300Xanthobacter autotrophicus Py2, complete genomehypothetical protein3e-0753.9
NC_020181:1344259:136039813603981360664267Enterobacter aerogenes EA1509E, complete genomeFIG032766: hypothetical protein3e-0753.9
NC_014500:443874:464035464035464307273Dickeya dadantii 3937 chromosome, complete genomeputative cytoplasmic protein4e-0753.5
NC_021066:1393750:140395214039521404230279Raoultella ornithinolytica B6, complete genomehypothetical protein4e-0753.5
NC_015761:1488807:150493215049321505210279Salmonella bongori NCTC 12419, complete genomehypothetical protein4e-0753.5
NC_009668:445134:464488464488464787300Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein5e-0753.1
NC_014107:171170:198644198644198910267Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,hypothetical protein7e-0752.8
NC_010660:175200:204009204009204311303Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencehypothetical protein2e-0651.6
NC_007608:97092:120130120130120432303Shigella boydii Sb227 plasmid pSB4_227, complete sequencehypothetical protein2e-0651.6
NC_014306:3102000:312397531239753124241267Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein1e-0651.6
NC_007607:87000:113078113078113368291Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein2e-0651.2
NC_016147:1672482:168687416868741687119246Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein4e-0650.1
NC_006905:3780000:379030337903033790590288Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein5e-0649.7