Pre_GI: BLASTP Hits

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Query: NC_004129:4434259:4448721 Pseudomonas fluorescens Pf-5, complete genome

Start: 4448721, End: 4450814, Length: 2094

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020541:268406:2723242723242745342211Rhodanobacter sp. 2APBS1, complete genomephosphoglycerol transferase family protein, alkaline phosphatase superfamily6e-24112
NC_002940:1065246:1078607107860710805681962Haemophilus ducreyi 35000HP, complete genomehypothetical protein1e-1999
NC_007575:319119:3236653236653255871923Sulfurimonas denitrificans DSM 1251, complete genomesulfatase2e-1998.6
NC_009052:144619:1585861585861605501965Shewanella baltica OS155, complete genomesulfatase4e-1997.1
NC_007575:319119:3215553215553234951941Sulfurimonas denitrificans DSM 1251, complete genomesulfatase2e-1894.7
NC_009012:75000:9396593965958541890Clostridium thermocellum ATCC 27405, complete genomesulfatase2e-1687.8
NC_009441:3597020:3615467361546736174251959Flavobacterium johnsoniae UW101 chromosome, complete genomesulfatase5e-1480.1
NC_015172:850802:8697618697618715901830Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomesulfatase1e-1275.9
NC_004578:6334735:6350829635082963523341506Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-1274.3
NC_015975:752927:7554887554887575482061Lactobacillus ruminis ATCC 27782 chromosome, complete genomeSulfatase family protein8e-1169.7
NC_009725:692237:7368167368167387441929Bacillus amyloliquefaciens FZB42, complete genomeYfnI1e-1069.3
NC_008497:1498430:1506765150676515088222058Lactobacillus brevis ATCC 367, complete genomePhosphoglycerol transferase related protein, alkaline phosphatase superfamily4e-1067.4
NC_019842:710308:7265227265227284501929Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein3e-1067.4
NC_009785:1414892:1420226142022614224182193Streptococcus gordonii str. Challis substr. CH1, complete genomesulfatase8e-1066.2
NC_003366:728859:7531277531277549351809Clostridium perfringens str. 13, complete genomehypothetical protein9e-1065.9
NC_010723:3395187:3397359339735933991791821Clostridium botulinum E3 str. Alaska E43, complete genomesulfatase family protein9e-1065.9
NC_008262:2433979:2435726243572624376091884Clostridium perfringens SM101, complete genomesulfatase1e-0965.9
NC_008261:676000:7004377004377022451809Clostridium perfringens ATCC 13124, complete genomesulfatase family protein1e-0965.9
NC_013440:5509790:5532558553255855348552298Haliangium ochraceum DSM 14365, complete genomesulfatase2e-0965.1
NC_015556:130437:1568271568271583351509Pseudomonas fulva 12-X chromosome, complete genomecholine-sulfatase3e-0964.3
NC_014334:769205:7915457915457936382094Lactobacillus casei str. Zhang chromosome, complete genome5e-0963.5
NC_015602:117939:1365591365591386192061Lactobacillus kefiranofaciens ZW3 chromosome, complete genomephosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase5e-0963.5
NC_013172:542896:5428965428965443321437Brachybacterium faecium DSM 4810, complete genomearylsulfatase A family protein6e-0963.2
NC_009615:2709040:2725856272585627272141359Parabacteroides distasonis ATCC 8503 chromosome, complete genomesecreted sulfatase1e-0862
NC_008530:1551356:1567918156791815699872070Lactobacillus gasseri ATCC 33323, complete genomePhosphoglycerol transferase related protein, alkaline phosphatase superfamily2e-0861.6
NC_013504:1468227:1481697148169714837662070Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein2e-0861.2
NC_005362:1651767:1671938167193816739291992Lactobacillus johnsonii NCC 533, complete genomehypothetical protein2e-0861.2
NC_015428:1668465:1680757168075716828202064Lactobacillus buchneri NRRL B-30929 chromosome, complete genomesulfatase2e-0861.2
NC_007333:1559321:1569342156934215707571416Thermobifida fusca YX, complete genomen-acetylgalactosamine-6-sulfate sulfatase3e-0860.8
NC_003366:2556457:2558205255820525600941890Clostridium perfringens str. 13, complete genomehypothetical protein4e-0860.5
NC_008261:2770468:2772216277221627741051890Clostridium perfringens ATCC 13124, complete genomesulfatase5e-0860.5
NC_020291:6216000:6220063622006362219491887Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesulfatase family protein6e-0860.1
NC_008528:610070:6136796136796159132235Oenococcus oeni PSU-1, complete genomePhosphoglycerol transferase or related protein, alkaline phosphatase superfamily6e-0860.1
NC_010424:1778459:1792371179237117938221452Candidatus Desulforudis audaxviator MP104C, complete genomesulfatase8e-0859.7
NC_007929:428743:4324524324524345212070Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSulfatase family protein2e-0758.5
NC_012029:1604291:1614554161455416161221569Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomesulfatase2e-0758.5
NC_014106:419511:4395864395864416462061Lactobacillus crispatus ST1, complete genomeSulfatase3e-0757.4
NC_018528:446610:4680654680654701222058Lactobacillus helveticus R0052 chromosome, complete genomephosphoglycerol transferase3e-0757.4
NC_015978:996933:1012245101224510142361992Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeglycerol phosphate lipoteichoic acid synthase 15e-0757
NC_014724:439594:4622804622804643402061Lactobacillus amylovorus GRL 1112 chromosome, complete genomeSulfatase6e-0756.6
NC_015214:437733:4620294620294640892061Lactobacillus acidophilus 30SC chromosome, complete genomeSulfatase6e-0756.6
NC_016776:66223:7005570055716351581Bacteroides fragilis 638R, complete genomeputative choline-sulfatase1e-0655.8
NC_010674:3581044:3582757358275735845711815Clostridium botulinum B str. Eklund 17B, complete genomesulfatase family protein2e-0654.7
NC_010080:445398:4623634623634644202058Lactobacillus helveticus DPC 4571, complete genomeputative phosphoglycerol transferase3e-0654.3
NC_010723:420025:4424574424574443071851Clostridium botulinum E3 str. Alaska E43, complete genomesulfatase4e-0653.9
NC_002927:506183:5061835061835077721590Bordetella bronchiseptica RB50, complete genomeputative sulfatase4e-0653.9
NC_002928:507749:5077495077495093381590Bordetella parapertussis 12822, complete genomeputative sulfatase4e-0653.9
NC_013421:801542:8015428015428032721731Pectobacterium wasabiae WPP163, complete genomesulfatase4e-0653.9
NC_007954:1324062:1350163135016313515391377Shewanella denitrificans OS217, complete genomesulfatase1e-0552.8