Pre_GI: BLASTP Hits

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Query: NC_003384:157158:169333 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid

Start: 169333, End: 170619, Length: 1287

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a multidrug resistant strain of Salmonella typhi. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete0773
NC_009349:78000:8685886858885731716Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTniA protein0768
NC_016860:4055117:4082776408277640844551680Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase TniA0743
NC_013365:92973:1039281039281051961269Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeTniA protein0742
NC_016616:2644883:2650240265024026519221683Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase0651
NC_017986:1885613:1888422188842218901011680Pseudomonas putida ND6 chromosome, complete genomeTniA0639
NC_014215:2259290:2281505228150522832051701Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,TniA protein2e-128459
NC_013235:3913000:3930560393056039322241665Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region4e-121434
NC_019673:6394319:6402870640287064042431374Saccharothrix espanaensis DSM 44229 complete genomeputative integrase1e-103376
NC_011992:2279752:228852622885262289167642Acidovorax ebreus TPSY, complete genome5e-73275
NC_008782:1277117:1296668129666812983381671Acidovorax sp. JS42, complete genomeIntegrase, catalytic region2e-64246
NC_016616:915755:9399229399229418231902Dechlorosoma suillum PS chromosome, complete genomeintegrase family protein5e-63241
NC_009348:1064664:1073012107301210748921881Aeromonas salmonicida subsp. salmonicida A449, complete genomeTniA transposase1e-59231
NC_011761:2217632:2229241222924122311211881Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetransposon transposition protein B8e-59228
NC_007498:134442:1538771538771557541878Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein2e-58226
NC_012856:207194:2113422113422132341893Ralstonia pickettii 12D chromosome 1, complete genomeIntegrase catalytic region1e-56221
NC_002678:5060670:5088718508871850903251608Mesorhizobium loti MAFF303099, complete genometransposase2e-56219
NC_007912:231817:2359352359352377701836Saccharophagus degradans 2-40, complete genomeUrease, beta subunit3e-56219
NC_010682:1652636:1669589166958916715111923Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein1e-55217
NC_010682:3033646:3051516305151630534381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase9e-54211
NC_010682:1763769:1768716176871617706381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase9e-54211
NC_017162:270460:2739922739922759021911Acinetobacter baumannii 1656-2 chromosome, complete genometransposase3e-53209
NC_012440:1215838:1236077123607712379361860Persephonella marina EX-H1, complete genomeTniA transposase4e-53209
NC_010939:405477:4235454235454254731929Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative transposase3e-52206
NC_020409:2222000:2225628222562822275471920Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase catalytic region2e-52206
NC_017387:247462:2474622474622493721911Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposition protein B7e-52205
NC_010410:3606826:3693499369349936954091911Acinetobacter baumannii AYE, complete genomeputative transposase7e-52204
NC_008061:2153495:2168333216833321701321800Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region5e-50198
NC_008543:90312:99641996411014401800Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region5e-50198
NC_012856:2633890:2649928264992826518261899Ralstonia pickettii 12D chromosome 1, complete genomeTniA transposase7e-50198
NC_010120:1065833:1074745107474510762891545Neisseria meningitidis 053442, complete genomeconserved hypothetical protein4e-49196
NC_009656:3127240:3138806313880631406501845Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase catalytic subunit6e-49195
NC_007575:1663088:1667067166706716689231857Sulfurimonas denitrificans DSM 1251, complete genomeintegrase catalytic subunit2e-48193
NC_009254:637952:6919556919556935831629Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit1e-46187
NC_013166:32474:3602436024378921869Kangiella koreensis DSM 16069, complete genomeTransposase-like Mu1e-46187
NC_015161:1748236:1755388175538817573311944Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein3e-45183
NC_014752:1063506:1072340107234010735271188Neisseria lactamica ST-640, complete genomeintegrase3e-45182
NC_012988:2507142:2508022250802225096801659Methylobacterium extorquens DM4, complete genometransposase of ISMdi29, ISNCY family6e-44178
NC_007517:3430237:3435106343510634370161911Geobacter metallireducens GS-15, complete genometransposase1e-42174
NC_017986:5833819:5844511584451158462291719Pseudomonas putida ND6 chromosome, complete genomeintegrase catalytic subunit8e-41168
NC_009659:3384997:3399629339962934014611833Janthinobacterium sp. Marseille chromosome, complete genometransposase4e-34146
NC_007626:4135961:4135961413596141379221962Magnetospirillum magneticum AMB-1, complete genometransposase3e-34146
NC_015572:1:4276342763446431881Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit1e-29131
NC_014924:1701952:1709896170989617112961401Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeIntegrase catalytic region3e-28126
NC_008577:4611431:4638394463839446402471854Shewanella sp. ANA-3 chromosome 1, complete sequenceIntegrase, catalytic region5e-28125
NC_015572:1:1358813588155761989Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit2e-27124
NC_014539:1:1839118391203521962Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase catalytic subunit7e-27122
NC_010501:1:80668066100241959Pseudomonas putida W619, complete genomeIntegrase catalytic region6e-26119
NC_002947:8394:1713317133191662034Pseudomonas putida KT2440, complete genometransposase, putative6e-26119
NC_009512:1:80468046100041959Pseudomonas putida F1, complete genomeIntegrase, catalytic region6e-26119
NC_010322:1:88288828107861959Pseudomonas putida GB-1 chromosome, complete genomeintegrase catalytic subunit6e-26119
NC_013174:309943:342258342258342764507Jonesia denitrificans DSM 20603, complete genomeTniAdelta11e-25117
NC_014366:3555425:3567950356795035698481899Gamma proteobacterium HdN1, complete genomeIntegrase, catalytic region6e-25115
NC_012968:63898:7520175201771921992Methylotenera mobilis JLW8, complete genomeIntegrase catalytic region8e-25115
NC_007509:3668:2569725697276461950Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein6e-24112
NC_007618:724238:7305517305517326652115Brucella melitensis biovar Abortus 2308 chromosome I, completeIntegrase, catalytic domain4e-23109
NC_003317:1263562:1271799127179912737601962Brucella melitensis 16M chromosome I, complete sequenceTRANSPOSASE4e-23109
NC_010103:704875:7112707112707130061737Brucella canis ATCC 23365 chromosome I, complete sequenceIntegrase, catalytic domain4e-23109
NC_017248:721764:7297577297577318712115Brucella melitensis NI chromosome chromosome I, complete sequenceIntegrase, catalytic domain protein4e-23109
NC_017246:727143:7334897334897356032115Brucella melitensis M5-90 chromosome chromosome I, completeintegrase, catalytic domain -containing protein4e-23109
NC_017244:726893:7332397332397353532115Brucella melitensis M28 chromosome chromosome 1, complete sequenceintegrase catalytic domain-containing protein4e-23109
NC_012441:727500:7332317332317353452115Brucella melitensis ATCC 23457 chromosome I, complete sequenceintegrase catalytic domain-containing protein4e-23109
NC_006932:727943:7342567342567363702115Brucella abortus biovar 1 str. 9-941 chromosome I, completetransposase, hypothetical4e-23109
NC_015857:731982:7393107393107414242115Brucella pinnipedialis B2/94 chromosome chromosome 1, completeintegrase catalytic subunit4e-23109
NC_004310:706238:7125517125517146652115Brucella suis 1330 chromosome I, complete sequencetransposase, putative4e-23109
NC_010742:726146:7325737325737346872115Brucella abortus S19 chromosome 1, complete sequenceIntegrase, catalytic domain protein4e-23109
NC_013119:707804:7158337158337179472115Brucella microti CCM 4915 chromosome 1, complete sequencetransposase, putative4e-23109
NC_016778:329288:3403393403393424532115Brucella canis HSK A52141 chromosome 1, complete sequencetransposase4e-23109
NC_016795:1673464:1681716168171616838302115Brucella abortus A13334 chromosome 1, complete sequencetransposase4e-23109
NC_016797:706980:7124827124827145962115Brucella suis VBI22 chromosome I, complete sequencetransposase4e-23109
NC_017251:707000:7125377125377146512115Brucella suis 1330 chromosome I, complete genometransposase4e-23109
NC_010169:725152:7314657314657335792115Brucella suis ATCC 23445 chromosome I, complete sequenceIntegrase, catalytic domain4e-22106
NC_008209:761487:7708147708147729852172Roseobacter denitrificans OCh 114, complete genometransposase, putative5e-2099
NC_015942:2544407:2566316256631625683522037Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase catalytic subunit7e-1995.5
NC_008686:405159:4264664264664285982133Paracoccus denitrificans PD1222 chromosome 1, complete sequenceIntegrase, catalytic region7e-1995.5
NC_012855:39751:6146561465634772013Ralstonia pickettii 12D plasmid pRp12D01, complete sequenceIntegrase catalytic region7e-1995.5
NC_009659:892272:9091379091379110831947Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein2e-1893.6
NC_007520:407627:4259384259384278481911Thiomicrospira crunogena XCL-2, complete genomeIntegrase, catalytic region2e-1790.5
NC_010086:1816378:1860062186006218627702709Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region5e-1685.9
NC_009255:1105786:1160917116091711636252709Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit5e-1685.9
NC_012857:41946:4990849908526102703Ralstonia pickettii 12D chromosome 2, complete genomeIntegrase catalytic region9e-1685.1
NC_010678:900389:9083519083519110532703Ralstonia pickettii 12J chromosome 2, complete sequenceIntegrase catalytic region9e-1685.1
NC_015671:255808:2646962646962661051410Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase-like Mu2e-1584.3
NC_013893:1723939:1725148172514817265901443Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeTn552 transposase4e-1582.8
NC_009956:88354:9555895558970511494Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequenceintegrase catalytic region8e-1582
NC_011777:161505:1772771772771787221446Bacillus cereus AH820 plasmid pAH820_272, complete sequenceputative transposase1e-1481.3
NC_009256:176403:1834711834711864102940Burkholderia vietnamiensis G4 chromosome 1, complete sequenceintegrase catalytic subunit2e-1480.5
NC_007413:1405817:1407584140758414092661683Anabaena variabilis ATCC 29413, complete genomeIntegrase, catalytic region2e-1480.5
NC_017075:1837966:1851199185119918539372739Rubrivivax gelatinosus IL144, complete genomeintegrase catalytic subunit6e-1479
NC_010002:1879220:1892059189205918940111953Delftia acidovorans SPH-1, complete genomehypothetical protein6e-1479
NC_010505:5035668:5061208506120850634722265Methylobacterium radiotolerans JCM 2831, complete genomeIntegrase catalytic region7e-1479
NC_011884:2397248:2404335240433524070882754Cyanothece sp. PCC 7425, complete genomeIntegrase catalytic region2e-1377.8
NC_008435:2658986:2667838266783826700002163Rhodopseudomonas palustris BisA53, complete genomeIntegrase, catalytic region3e-1376.6
NC_015146:144565:1445651445651459531389Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, completeMu transposase/integrase5e-1375.9
NC_016616:2997348:3024838302483830274982661Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase1e-1275.1
NC_009050:212270:2620552620552644032349Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceIntegrase, catalytic region9e-1375.1
NC_012721:1986436:1998174199817419994301257Burkholderia glumae BGR1 chromosome 2, complete genome3e-1273.6
NC_016616:2112211:2131716213171621343702655Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase9e-1272
NC_015671:3093596:3101288310128831027181431Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase-like Mu9e-1272
NC_008061:190287:2051762051762071641989Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region2e-1170.9
NC_014550:3377834:3423654342365434251621509Arthrobacter arilaitensis Re117, complete genome2e-1170.9
NC_010515:2111691:2128434212843421301611728Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region2e-1170.9
NC_008542:197500:2364472364472394793033Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceIntegrase, catalytic region3e-1170.1
NC_008060:3155133:3187324318732431902542931Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceIntegrase, catalytic region3e-1170.1
NC_007948:4646344:4675106467510646777362631Polaromonas sp. JS666, complete genomehypothetical protein7e-1168.9
NC_010681:4299979:4326918432691843298002883Burkholderia phytofirmans PsJN chromosome 1, complete sequenceIntegrase catalytic region1e-1068.2
NC_016901:2594942:2614389261438926163231935Shewanella baltica OS678 chromosome, complete genomeintegrase catalytic subunit1e-1067.8
NC_009997:2635025:2654472265447226564061935Shewanella baltica OS195, complete genomeIntegrase catalytic region1e-1067.8
NC_020050:1:1313613136155262391Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialTnsA endonuclease family protein,integrase family protein2e-1067.4
NC_019973:6102442:6121481612148161237392259Mesorhizobium australicum WSM2073, complete genomeintegrase family protein4e-1066.2
NC_019673:6394319:640258064025806402900321Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein7e-1065.5
NC_015851:89006:1057801057801078552076Acidithiobacillus caldus SM-1 megaplasmid, complete sequencetransposon Tn7 transposition protein tnsB2e-0964.3
NC_015740:4508375:4518273451827345203332061Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeintegrase core domain-containing protein4e-0962.8
NC_012587:2326000:2339902233990223423252424Rhizobium sp. NGR234, complete genomehypothetical protein7e-0962.4
NC_012968:507988:5105355105355131772643Methylotenera mobilis JLW8, complete genomeIntegrase catalytic region9e-0961.6
NC_015953:4045500:4052690405269040546932004Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase catalytic subunit1e-0861.2
NC_010501:2511887:2524038252403825259181881Pseudomonas putida W619, complete genomeIntegrase catalytic region2e-0860.5
NC_010625:1602191:1614741161474116169272187Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein3e-0860.5
NC_015733:5955467:5969934596993459721022169Pseudomonas putida S16 chromosome, complete genomeTn7-like transposition protein B4e-0859.7
NC_014814:2588628:2590065259006525915251461Mycobacterium sp. Spyr1 chromosome, complete genomeMu transposase/integrase2e-0757
NC_014814:4235477:4257726425772642591861461Mycobacterium sp. Spyr1 chromosome, complete genomeMu transposase/integrase2e-0757
NC_013441:5025444:5047476504747650497252250Gordonia bronchialis DSM 43247, complete genomeIntegrase catalytic region5e-0755.8
NC_010501:5735656:5750541575054157527122172Pseudomonas putida W619, complete genomeTn7-like transposition protein B3e-0653.5
NC_014657:2127500:2136058213605821382202163Caldicellulosiruptor owensensis OL chromosome, complete genomeintegrase catalytic region5e-0652.8
NC_014307:2760347:2768927276892727708971971Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein5e-0652.8