Pre_GI: BLASTP Hits

Some Help

Query: NC_003143:741169:748875 Yersinia pestis CO92, complete genome

Start: 748875, End: 749609, Length: 735

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3724500:373824737382473739017771Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Flp pilus assembly protein TadD, contains TPRrepeat2e-126451
NC_008149:650706:658413658413659183771Yersinia pestis Nepal516, complete genomehypothetical protein2e-126451
NC_004088:3859173:387288738728873873657771Yersinia pestis KIM, complete genomehypothetical protein2e-126451
NC_005810:3333000:334081733408173341587771Yersinia pestis biovar Microtus str. 91001, complete genomeTPR repeat-containing protein2e-126451
NC_008150:3430000:344376934437693444539771Yersinia pestis Antiqua, complete genomehypothetical protein2e-126451
NC_009381:522731:530436530436531206771Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-126451
NC_014029:792719:800419800419801189771Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-126451
NC_017154:734875:742581742581743351771Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-126451
NC_017160:737000:744760744760745530771Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-126451
NC_017168:341233:355657355657356427771Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-126451
NC_006155:3992818:401166840116684012438771Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-125448
NC_010159:259695:273409273409274179771Yersinia pestis Angola, complete genomeputative lipoprotein2e-125447
NC_009708:692508:700268700268701038771Yersinia pseudotuberculosis IP 31758 chromosome, complete genomelipoprotein5e-125446
NC_010465:733916:740637740637741407771Yersinia pseudotuberculosis YPIII, complete genomeputative lipoprotein3e-124444
NC_015224:3820338:384760338476033848352750Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative tight adherance operon protein8e-77286
NC_008800:3955284:396932339693233970090768Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein8e-71266
NC_010634:3905369:392365639236563923895240Yersinia pseudotuberculosis PB1/+, complete genomeputative lipoprotein2e-38159
NC_010634:3905369:392312939231293923443315Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-33142
NC_016513:974402:984981984981985742762Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeFlp pilus assembly protein TadD5e-33141
NC_013416:668152:678721678721679482762Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTadD9e-33140
NC_012913:167034:174340174340175101762Aggregatibacter aphrophilus NJ8700, complete genomeTadD3e-32138
NC_013716:4306695:4373985437398543752891305Citrobacter rodentium ICC168, complete genomeputative tight adherence protein D1e-31136