Pre_GI: BLASTP Hits

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Query: NC_002947:1268089:1276657 Pseudomonas putida KT2440, complete genome

Start: 1276657, End: 1277367, Length: 711

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007492:3954345:398111639811163981862747Pseudomonas fluorescens PfO-1, complete genomeResolvase-like8e-62236
NC_008463:1912348:192200019220001922695696Pseudomonas aeruginosa UCBPP-PA14, complete genomepossible resolvase1e-52206
NC_009937:1733196:174168017416801742357678Azorhizobium caulinodans ORS 571, complete genomeresolvase family protein1e-36153
NC_014923:4017575:403353240335324034305774Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeResolvase domain4e-32137
NC_007517:2564361:258513825851382585788651Geobacter metallireducens GS-15, complete genomeResolvase-like4e-32137
NC_016812:463000:480936480936481592657Sinorhizobium fredii HH103, complete genometransposon Tn552 DNA-invertase binR2e-31135
NC_011146:3991683:399538239953823996041660Geobacter bemidjiensis Bem, complete genomeResolvase domain2e-31135
NC_011369:4395773:440916744091674409817651Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeResolvase domain6e-31134
NC_004463:5540924:555310755531075553823717Bradyrhizobium japonicum USDA 110, complete genomeputative resolvase1e-29130
NC_016812:4246542:425467142546714255303633Sinorhizobium fredii HH103, complete genomeDNA-invertase1e-29129
NC_008609:251608:272195272195272869675Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain5e-29127
NC_011769:3434744:344837734483773449063687Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeResolvase domain protein7e-29127
NC_010084:2674972:268798226879822688695714Burkholderia multivorans ATCC 17616 chromosome 1, completeresolvase domain-containing protein3e-28125
NC_010804:831000:836078836078836791714Burkholderia multivorans ATCC 17616 chromosome 1, completeserine recombinase3e-28125
NC_010501:3987615:399935239993524000065714Pseudomonas putida W619, complete genomeResolvase domain6e-28124
NC_011146:1998981:200636420063642007050687Geobacter bemidjiensis Bem, complete genomeResolvase domain2e-27122
NC_011000:3362382:337420133742013374914714Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative phage resolvase/recombinase for integration and excision2e-27122
NC_010511:5424004:543344754334475434157711Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein2e-27122
NC_009485:5171658:518306951830695183713645Bradyrhizobium sp. BTAi1 chromosome, complete genomeDNA-invertase2e-27122
NC_002678:3701500:373736337373633738010648Mesorhizobium loti MAFF303099, complete genomesimilar to DNA invertase5e-27121
NC_012526:2155947:217099521709952171678684Deinococcus deserti VCD115, complete genomeputative resolvase, N terminal domain (putative serine recombinase family, catalytic domain)1e-25116
NC_007298:2689731:269958526995852700274690Dechloromonas aromatica RCB, complete genomeResolvase, N-terminal8e-25114
NC_017249:8510121:853227585322758532970696Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-25114
NC_011146:3426500:346533034653303465995666Geobacter bemidjiensis Bem, complete genomeResolvase domain4e-25114
NC_009485:7021228:703264170326417033312672Bradyrhizobium sp. BTAi1 chromosome, complete genomeresolvase9e-25113
NC_011894:7563668:758709175870917587786696Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein9e-25113
NC_013173:953633:976055976055976738684Desulfomicrobium baculatum DSM 4028, complete genomeResolvase domain protein5e-24111
NC_007778:1053462:106665810666581067362705Rhodopseudomonas palustris HaA2, complete genomeResolvase-like2e-23108
NC_010505:4396800:441274144127414413436696Methylobacterium radiotolerans JCM 2831, complete genomeResolvase domain protein3e-23108
NC_009431:40917:563255632557005681Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, completehypothetical protein4e-23108
NC_014958:843456:854304854304854969666Deinococcus maricopensis DSM 21211 chromosome, complete genomeResolvase domain-containing protein2e-22105
NC_016609:606000:625315625315625977663Niastella koreensis GR20-10 chromosome, complete genomeResolvase domain-containing protein5e-22104
NC_010725:2589014:259846725984672599141675Methylobacterium populi BJ001, complete genomeResolvase domain4e-21101
NC_014958:557208:568633568633569298666Deinococcus maricopensis DSM 21211 chromosome, complete genomeResolvase domain-containing protein7e-21100
NC_007925:4060635:407180240718024072548747Rhodopseudomonas palustris BisB18, complete genomeResolvase-like2e-2099
NC_012988:4633930:464917846491784649987810Methylobacterium extorquens DM4, complete genomeresolvase, N-terminal9e-2097.1
NC_010172:4185904:420216842021684202977810Methylobacterium extorquens PA1, complete genomeResolvase domain9e-2097.1
NC_011146:3426500:346821434682143468807594Geobacter bemidjiensis Bem, complete genomeResolvase domain3e-1789
NC_008699:1132790:114850611485061149189684Nocardioides sp. JS614, complete genomeResolvase, N-terminal domain2e-1582.8
NC_010162:8760128:876213487621348762838705Sorangium cellulosum 'So ce 56', complete genomeputative recombinase1e-1480.1
NC_016609:7608723:761556276155627616245684Niastella koreensis GR20-10 chromosome, complete genomeResolvase domain-containing protein2e-1479.3
NC_009077:3851203:3859860385986038610021143Mycobacterium sp. JLS, complete genomeResolvase, N-terminal domain2e-1479.3
NC_013441:1487058:149085514908551491550696Gordonia bronchialis DSM 43247, complete genomeResolvase domain protein4e-1478.2
NC_006582:2944237:2992454299245429938571404Bacillus clausii KSM-K16, complete genomesite-specific recombinase for integration and excision6e-1270.9
NC_015660:739040:7405367405367419271392Geobacillus thermoglucosidasius C56-YS93 chromosome, completeResolvase domain-containing protein4e-1168.6
NC_014158:1479313:149176514917651492412648Tsukamurella paurometabola DSM 20162 chromosome, complete genomeResolvase domain protein7e-1167.4
NC_016906:3006748:301666730166673017305639Gordonia polyisoprenivorans VH2 chromosome, complete genomeresolvase3e-1065.5
NC_006322:4149500:4174019417401941752631245Bacillus licheniformis ATCC 14580, complete genomeSpoIVCA4e-1065.1
NC_006270:4149004:4173904417390441751481245Bacillus licheniformis ATCC 14580, complete genomesite-specific DNA recombinase4e-1065.1
NC_007712:1182518:119172311917231192313591Sodalis glossinidius str. 'morsitans', complete genomephage DNA-invertase6e-1064.7
NC_014915:2963500:3002419300241930038071389Geobacillus sp. Y412MC52 chromosome, complete genomeResolvase domain protein6e-1064.3
NC_013411:597235:6001286001286015161389Geobacillus sp. Y412MC61, complete genomeResolvase domain protein6e-1064.3
NC_015160:3556114:355965335596533560171519Odoribacter splanchnicus DSM 20712 chromosome, complete genomeResolvase domain7e-1064.3
NC_008345:4107847:413391541339154134481567Shewanella frigidimarina NCIMB 400, complete genomeResolvase, N-terminal domain protein3e-0962.4
NC_008786:1553833:156447815644781565035558Verminephrobacter eiseniae EF01-2, complete genomeResolvase, N-terminal domain3e-0962.4
NC_018080:3055358:307262430726243073181558Pseudomonas aeruginosa DK2 chromosome, complete genomeresolvase domain-containing protein3e-0962
NC_013132:7954000:797813379781337978768636Chitinophaga pinensis DSM 2588, complete genomeresolvase domain protein7e-0960.8
NC_013862:27991:326423264233361720Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequenceResolvase domain protein8e-0960.8
NC_009338:2042664:206317020631702063799630Mycobacterium gilvum PYR-GCK chromosome, complete genomeresolvase domain-containing protein1e-0860.5
NC_011283:2836000:289252528925252893121597Klebsiella pneumoniae 342 chromosome, complete genomeDNA-invertase hin1e-0860.1
NC_004349:3938:167331673317290558Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceISSod9, DNA-invertase4e-0858.5
NC_014815:841484:877025877025877648624Micromonospora sp. L5 chromosome, complete genomeresolvase domain protein4e-0858.5
NC_009454:136468:1560681560681575431476Pelotomaculum thermopropionicum SI, complete genomehypothetical protein7e-0857.8
NC_017351:643674:6436746436746450501377Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeresolvase, N terminal domain protein8e-0857.4
NC_013850:2182337:224002122400212240590570Klebsiella variicola At-22 chromosome, complete genomeResolvase domain protein8e-0857.4
NC_002655:301940:306856306856307446591Escherichia coli O157:H7 EDL933, complete genomeDNA invertase from prophage CP-933H9e-0857.4
NC_014550:889500:914521914521915093573Arthrobacter arilaitensis Re117, complete genomeputative resolvase1e-0757
NC_015730:1107840:112029511202951120915621Roseobacter litoralis Och 149 chromosome, complete genomebacteriophage DNA-invertase2e-0756.2
NC_017337:1107930:1107930110793011093151386Staphylococcus aureus subsp. aureus ED133 chromosome, completePhage integrase2e-0756.2
NC_016624:112919:112919112919113497579Azospirillum lipoferum 4B plasmid AZO_p5, complete sequencesite-specific DNA recombinase, ISAli20, Tn3 family2e-0756.2
NC_015671:255808:266131266131266709579Cellvibrio gilvus ATCC 13127 chromosome, complete genomeResolvase domain-containing protein2e-0756.2
AC_000091:1191353:121126212112621211816555Escherichia coli W3110 DNA, complete genomesite-specific DNA recombinase2e-0756.2
NC_000913:1188999:120890812089081209462555Escherichia coli K12, complete genomee14 prophage; site-specific DNA recombinase2e-0756.2
NC_002695:301939:306891306891307445555Escherichia coli O157:H7 str. Sakai, complete genomeDNA-invertase2e-0755.8
NC_011353:305820:310772310772311326555Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-invertase2e-0755.8
NC_013008:306953:310772310772311326555Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA invertase from prophage CP-933H2e-0755.8
NC_006511:2718401:273066527306652731159495Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-0755.8
NC_011147:2713937:272620127262012726695495Salmonella enterica subsp. enterica serovar Paratyphi A str2e-0755.8
NC_006347:3166000:317657831765783177171594Bacteroides fragilis YCH46, complete genomeserinr type site-specific recombinase Mpi3e-0755.5
NC_011094:2791719:282196128219612822533573Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-invertase hin3e-0755.5
NC_003228:3212500:323794832379483238541594Bacteroides fragilis NCTC 9343, complete genomemultiple promoter invertase3e-0755.5
NC_016776:3258939:327534632753463275939594Bacteroides fragilis 638R, complete genomemultiple promoter invertase3e-0755.5
NC_009342:135500:153413153413154030618Corynebacterium glutamicum R chromosome, complete genomehypothetical protein4e-0755.1
NC_011080:2870428:289148128914812892047567Salmonella enterica subsp. enterica serovar Newport str. SL254,DNA-invertase hin4e-0755.1
NC_011894:7421867:742715374271537428040888Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein4e-0755.1
NC_003197:2894344:291484229148422915414573Salmonella typhimurium LT2, complete genomeDNA-invertase Hin4e-0755.1
NC_016856:2896630:293507729350772935649573Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA-invertase Hin4e-0755.1
NC_016860:2917910:293840829384082938980573Salmonella enterica subsp. enterica serovar Typhimurium strDNA-invertase Hin4e-0755.1
NC_016863:2844883:288333028833302883902573Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA-invertase Hin4e-0755.1
NC_011083:2847318:288963028896302890193564Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA-invertase hin4e-0755.1
NC_010102:2862178:287925728792572879829573Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0754.7
NC_020181:5217000:524391752439175244486570Enterobacter aerogenes EA1509E, complete genomeDNA-invertase5e-0754.7
NC_018000:1207231:120989412098941210463570Sinorhizobium fredii USDA 257 chromosome, complete genometransposon Tn552 DNA-invertase BinR5e-0754.7
NC_005090:1812833:182048618204861821109624Wolinella succinogenes DSM 1740, complete genomeHYPOTHETICAL PROTEIN-Putative Site-specific recombinase6e-0754.3
NC_015859:3126500:313540431354043135973570Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element7e-0754.3
NC_010172:2722000:273599827359982736843846Methylobacterium extorquens PA1, complete genomeResolvase domain8e-0754.3
NC_008268:3335035:334145233414523341988537Rhodococcus sp. RHA1, complete genomeresolvase8e-0754.3
NC_014506:157396:171515171515172183669Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeResolvase domain-containing protein1e-0653.9
NC_008740:443274:465549465549466109561Marinobacter aquaeolei VT8, complete genomeResolvase, N-terminal domain1e-0653.5
NC_008044:1736000:175037117503711751012642Silicibacter sp. TM1040, complete genomeResolvase-like1e-0653.5
NC_008347:1636660:164962816496281650176549Maricaulis maris MCS10, complete genomeResolvase1e-0653.5
NC_013446:4281250:429116142911614291727567Comamonas testosteroni CNB-2, complete genomeResolvase-like protein1e-0653.1
NC_006873:1:129129722594Bacteroides fragilis NCTC 9343 plasmid pBF9343, complete sequenceputative resolvase/DNA invertase1e-0653.1
NC_007507:101887:112277112277112843567Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,Site-specific recombinase2e-0652.8
NC_010511:7400255:741977274197727420377606Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein3e-0652.4
NC_008740:257434:278266278266278829564Marinobacter aquaeolei VT8, complete genomeResolvase, N-terminal domain3e-0652.4
NC_011662:2402408:242481724248172425392576Thauera sp. MZ1T, complete genomeResolvase domain protein3e-0652.4
NC_007512:944941:972563972563973159597Pelodictyon luteolum DSM 273, complete genomeinvertase/recombinase like protein2e-0652.4
NC_012660:5793200:580082258008225801457636Pseudomonas fluorescens SBW25 chromosome, complete genomeputative DNA invertase4e-0652
NC_007086:3118116:313857331385733139139567Xanthomonas campestris pv. campestris str. 8004, complete genomeinvertase/recombinase protein4e-0652
NC_003902:1858349:190068919006891901255567Xanthomonas campestris pv. campestris str. ATCC 33913, completeinvertase/recombinase protein4e-0652
NC_013739:3006719:3019445301944530209741530Conexibacter woesei DSM 14684, complete genomeResolvase domain protein4e-0651.6
NC_014355:4151798:416274541627454163440696Candidatus Nitrospira defluvii, complete genomeputative site-specific DNA recombinase4e-0651.6
NC_015859:1099919:111698811169881117557570Corynebacterium variabile DSM 44702 chromosome, complete genomeDNA invertase4e-0651.6
NC_017986:1885613:188561318856131886236624Pseudomonas putida ND6 chromosome, complete genomeTniR protein6e-0651.2
NC_016048:3261166:326405332640533264604552Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase6e-0651.2
NC_016885:118182:137411137411138166756Pyrobaculum oguniense TE7 chromosome, complete genomeSite-specific recombinase, DNA invertase Pin-like protein6e-0651.2
NC_017986:1862408:187575318757531876328576Pseudomonas putida ND6 chromosome, complete genomeputative DNA invertase5e-0651.2
NC_014639:3520874:3536937353693735386251689Bacillus atrophaeus 1942 chromosome, complete genomeresolvase domain-containing protein7e-0650.8
CP002207:3520874:3536937353693735386251689Bacillus atrophaeus 1942, complete genomeresolvase domain protein7e-0650.8
NC_014151:370882:380301380301380930630Cellulomonas flavigena DSM 20109 chromosome, complete genomeResolvase domain protein7e-0650.8
NC_010617:988758:999292999292999924633Kocuria rhizophila DC2201, complete genomeputative resolvase7e-0650.8
NC_009350:137645:149139149139149753615Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeTniR protein9e-0650.8