Pre_GI: BLASTP Hits

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Query: NC_002505:1892430:1912283 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1912283, End: 1913671, Length: 1389

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012582:1976962:1996805199680519981931389Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein0956
NC_012578:1838470:1859416185941618608041389Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein0956
NC_009457:1444449:1465386146538614667741389Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0956
NC_016445:1363831:1383683138368313850231341Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetype I restriction enzyme, S subunit0926
NC_016944:1937645:1958591195859119599191329Vibrio cholerae IEC224 chromosome I, complete sequencetype I restriction enzyme, S subunit0917
NC_008322:2077628:2102612210261221039581347Shewanella sp. MR-7, complete genomerestriction modification system DNA specificity domain6e-118424
NC_012668:1688500:173472217347221735225504Vibrio cholerae MJ-1236 chromosome 1, complete sequencetype I restriction-modification system specificity subunit5e-95348
NC_016816:3952000:3974895397489539762801386Pantoea ananatis LMG 5342, complete genometype I restriction-modification system specificity subunit S3e-90332
NC_016816:3974895:3974895397489539762801386Pantoea ananatis LMG 5342, complete genometype I restriction-modification system specificity subunit S3e-90332
NC_003901:3591500:3598245359824535996271383Methanosarcina mazei Go1, complete genometype I restriction-modification system specificity subunit2e-81303
NC_013862:27991:4442444258031362Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequencerestriction modification system DNA specificity domain protein5e-81301
NC_017195:709098:7177537177537190571305Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetype I restriction-modification system specificity determinant2e-71270
NC_014370:885937:9180299180299193151287Prevotella melaninogenica ATCC 25845 chromosome chromosome I,type I restriction modification DNA specificity domain protein4e-63242
NC_007404:2743877:2758249275824927594511203Thiobacillus denitrificans ATCC 25259, complete genomeputative restriction endonuclease S subunit4e-59229
NC_020541:1717140:1726398172639817276871290Rhodanobacter sp. 2APBS1, complete genomerestriction endonuclease S subunit3e-58226
NC_014973:3452100:3487751348775134891301380Geobacter sp. M18 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-51204
NC_020829:1:1056710567119461380Pseudomonas denitrificans ATCC 13867, complete genomeputative type I restriction enzyme, S subunit3e-51202
NC_017506:1660072:1665738166573816670211284Marinobacter adhaerens HP15 chromosome, complete genometype I site-specific restriction-modification system, S subunit1e-50201
NC_007484:3035068:3044928304492830463911464Nitrosococcus oceani ATCC 19707, complete genomeRestriction endonuclease S subunits-like5e-47189
NC_015434:4640769:4650705465070546519911287Verrucosispora maris AB-18-032 chromosome, complete genomerestriction modification system DNA specificity subunit2e-45183
NC_012691:2476223:2493223249322324944881266Tolumonas auensis DSM 9187, complete genomerestriction modification system DNA specificity domain protein6e-45182
NC_009634:299327:3072993072993085221224Methanococcus vannielii SB chromosome, complete genomerestriction modification system DNA specificity subunit2e-44180
NC_008255:3331613:3360658336065833619561299Cytophaga hutchinsonii ATCC 33406, complete genomeprobable type I restriction-modification system1e-41171
NC_007508:1324000:1333012133301213343311320Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype I site-specific deoxyribonuclease (specificity subunit)1e-40167
NC_013161:4093322:4102957410295741043271371Cyanothece sp. PCC 8802, complete genomerestriction modification system DNA specificity domain protein4e-40166
NC_005773:106000:1218821218821232281347Pseudomonas syringae pv. phaseolicola 1448A, complete genometype I restriction-modification system specificity subunit9e-40164
NC_005966:3334864:3350154335015433515001347Acinetobacter sp. ADP1, complete genomeputative type I restriction-modification system specificity determinant for hsdM and hsdR (HsdS)2e-39164
NC_006510:2910000:2931510293151029328261317Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity determinant2e-38160
NC_014008:1463795:1483479148347914848221344Coraliomargarita akajimensis DSM 45221 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-36153
NC_020156:861402:8652618652618665051245Nonlabens dokdonensis DSW-6, complete genometype I restriction-modification system S(specificity) subunit3e-35149
NC_015164:493159:5474975474975487861290Bacteroides salanitronis DSM 18170 chromosome, complete genomerestriction modification system DNA specificity domain7e-34145
NC_006512:696000:6980826980826994281347Idiomarina loihiensis L2TR, complete genomeRestriction endonuclease S subunit5e-34145
NC_013861:3341955:3344087334408733454871401Legionella longbeachae NSW150, complete genometype I restriction-modification system (methylase_S)4e-34145
NC_014506:157396:1630731630731644011329Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeRestriction endonuclease S subunit1e-32141
NC_008702:1:90359035103841350Azoarcus sp. BH72, complete genomeType I site-specific deoxyribonuclease4e-32139
NC_009943:305854:3181503181503193911242Candidatus Desulfococcus oleovorans Hxd3, complete genomerestriction modification system DNA specificity domain6e-32139
NC_014253:431942:4581784581784595631386Methanohalobium evestigatum Z-7303 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-31137
NC_006350:1084930:1106431110643111077201290Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative type I restriction enzyme specificity protein4e-31135
NC_008787:685401:7055047055047067721269Campylobacter jejuni subsp. jejuni 81-176, complete genometype I restriction modification DNA specificity domain protein8e-30132
NC_014366:1435785:1438219143821914393101092Gamma proteobacterium HdN1, complete genome1e-29131
NC_011901:625712:6338466338466352221377Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I restriction-modification system, S subunit2e-29130
NC_007519:2847816:2856595285659528579411347Desulfovibrio alaskensis G20 chromosome, complete genometype I restriction-modification system, S subunit6e-29129
NC_008740:443274:4727574727574740761320Marinobacter aquaeolei VT8, complete genomerestriction modification system DNA specificity domain1e-28128
NC_003919:3396136:3402660340266034039401281Xanthomonas axonopodis pv. citri str. 306, complete genometype I restriction-modification system specificity determinant2e-28127
NC_009049:1934398:1962148196214819635181371Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencerestriction modification system DNA specificity domain4e-28126
NC_016830:5994494:6005173600517360065461374Pseudomonas fluorescens F113 chromosome, complete genomeType I restriction-modification system, specificity subunit S5e-28125
NC_009656:44500:8547085470868641395Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit S3e-27123
NC_014408:1340016:1352967135296713542741308Methanothermobacter marburgensis str. Marburg chromosome, completetype I restriction-modification enzyme, subunit S4e-27122
NC_008751:607209:6192036192036205191317Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain2e-26120
NC_009434:281474:2873472873472886121266Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, S subunit8e-26118
NC_002953:15416:3758837588388981311Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative type I restriction enzyme specificity protein1e-25118
NC_015663:2090442:2112256211225621135961341Enterobacter aerogenes KCTC 2190 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-25118
NC_014479:700281:7099167099167112171302Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeType I restriction modification system DNA specificity domain protein (HsdS)2e-25117
NC_008789:1237969:1256434125643412577231290Halorhodospira halophila SL1, complete genomerestriction modification system DNA specificity domain4e-25116
NC_002516:3079850:3094757309475730960521296Pseudomonas aeruginosa PAO1, complete genomehypothetical protein3e-25116
NC_008340:2034810:2045005204500520462641260Alkalilimnicola ehrlichei MLHE-1, complete genomerestriction modification system DNA specificity domain7e-25115
NC_015563:4911188:4921644492164449229751332Delftia sp. Cs1-4 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-24114
NC_015572:4618467:4638997463899746404661470Methylomonas methanica MC09 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-24114
NC_015422:2126614:2142598214259821440221425Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein3e-24113
NC_019896:3311000:3323359332335933246391281Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completerestriction modification system DNA specificity domain-containing protein7e-24112
NC_008942:815280:8215758215758229151341Methanocorpusculum labreanum Z, complete genomehypothetical protein6e-23108
NC_013446:1724000:1729654172965417309431290Comamonas testosteroni CNB-2, complete genomehypothetical protein2e-22107
NC_009077:2308634:2321856232185623232111356Mycobacterium sp. JLS, complete genomerestriction modification system DNA specificity domain7e-22105
NC_010498:4856011:4859524485952448608101287Escherichia coli SMS-3-5, complete genometype I restriction modification DNA specificity domain-containing protein1e-21104
NC_015576:1442713:145529414552941456130837Mycobacterium sp. JDM601 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-21103
NC_016786:1079000:1083532108353210847251194Corynebacterium diphtheriae HC01 chromosome, complete genometype I restriction enzyme, S subunit4e-21103
NC_016782:1076619:1083560108356010847531194Corynebacterium diphtheriae 241 chromosome, complete genometype I restriction enzyme, S subunit4e-21103
NS_000195:219785:2500322500322513541323Candidatus Cloacamonas acidaminovoransputative Type I restriction-modification system specificity subunit3e-20100
NC_018720:2138180:2150752215075221521011350Bifidobacterium asteroides PRL2011 chromosome, complete genometype I restriction-modification system1e-1998.2
NC_012669:1700626:1710630171063017119131284Beutenbergia cavernae DSM 12333, complete genomerestriction modification system DNA specificity domain protein3e-1997.1
NC_014632:1112733:1145320114532011466211302Ilyobacter polytropus DSM 2926 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1997.1
NC_011666:1661491:1673298167329816746171320Methylocella silvestris BL2, complete genometype I restriction enzyme5e-1995.9
NC_008740:257434:2748562748562762411386Marinobacter aquaeolei VT8, complete genomerestriction modification system DNA specificity domain1e-1895.1
NC_007086:3805390:3812748381274838140641317Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction endonuclease S subunits2e-1894.4
NC_010688:3740399:3747058374705837483741317Xanthomonas campestris pv. campestris, complete genomeType I site-specific deoxyribonuclease (specificity subunit)2e-1894.4
NC_008752:3684739:3713465371346537147541290Acidovorax avenae subsp. citrulli AAC00-1, complete genomerestriction modification system DNA specificity domain6e-1892.4
NC_018721:3155579:3166677316667731679571281Psychroflexus torquis ATCC 700755 chromosome, complete genometype I restriction-modification system, specificity subunit S HsdS1e-1791.3
NC_010831:788500:7976347976347989441311Chlorobium phaeobacteroides BS1, complete genomeputative type I restriction-modification system3e-1790.1
NC_015557:90503:9750697506988251320Hydrogenobaculum sp. 3684 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-1687.8
NC_020411:90538:9754197541988601320Hydrogenobaculum sp. HO, complete genomerestriction modification system DNA specificity domain containing protein1e-1687.8
NC_015587:90539:9754297542988611320Hydrogenobaculum sp. SHO chromosome, complete genomerestriction modification system DNA specificity domain protein1e-1687.8
NC_013515:715009:7417177417177431381422Streptobacillus moniliformis DSM 12112, complete genomerestriction modification system DNA specificity domain protein5e-1685.9
NC_014972:247028:2484182484182494911074Desulfobulbus propionicus DSM 2032 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-1685.9
NC_018645:13408:2450224502257221221Desulfobacula toluolica Tol2, complete genometype-1 restriction enzyme EcoKI specificity protein3e-1583.6
NC_014935:1287494:1297680129768013011373458Nitratifractor saLSUginis DSM 16511 chromosome, complete genome1e-1378.6
NC_017068:1143515:1184538118453811857701233Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction enzyme, specificity subunit1e-1378.2
NC_009142:949510:9749529749529761871236Saccharopolyspora erythraea NRRL 2338, complete genomeputative restriction modification system DNA specificity domain3e-1376.6
NC_008271:140846:1461601461601473351176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencetype I restriction-modification system specificity subunit4e-1376.6
NC_014217:2760898:2772811277281127739891179Starkeya novella DSM 506 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-1170.5
NC_014366:1435785:143932614393261439565240Gamma proteobacterium HdN1, complete genome4e-1170.1
NC_006672:47610:6642766427676351209Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceType I restriction-modification enzyme S subunit4e-1170.1
NC_015737:449914:4612094612094623541146Clostridium sp. SY8519, complete genomehypothetical protein8e-1168.9
NC_019964:2816990:2836848283684828381791332Halovivax ruber XH-70, complete genomerestriction endonuclease S subunit2e-1067.8
NC_014328:303063:3449343449343461871254Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, specificity subunit2e-1067.4
NC_016584:1998000:2044072204407220453071236Desulfosporosinus orientis DSM 765 chromosome, complete genomerestriction endonuclease S subunit1e-0965.1
NC_014828:1932971:1940347194034719424162070Ethanoligenens harbinense YUAN-3 chromosome, complete genomeN-6 DNA methylase3e-0963.5
NC_007793:459045:4590454590454602561212Staphylococcus aureus subsp. aureus USA300, complete genomeputative restriction/modification system specificity protein5e-0962.8
NC_010079:458940:4589404589404601511212Staphylococcus aureus subsp. aureus USA300_TCH1516, completetype I site-specific deoxyribonuclease specificity subunit5e-0962.8
NC_002745:450000:4525494525494537601212Staphylococcus aureus subsp. aureus N315, complete genomeprobable restriction modification system specificity subunit5e-0962.8
NC_002758:475516:4770654770654782761212Staphylococcus aureus subsp. aureus Mu50, complete genomeprobable restriction modification system specificity subunit5e-0962.8
NC_009487:486000:4878104878104890211212Staphylococcus aureus subsp. aureus JH9 chromosome, completerestriction modification system DNA specificity subunit5e-0962.8
NC_009632:486331:4878804878804890911212Staphylococcus aureus subsp. aureus JH1 chromosome, completerestriction modification system DNA specificity subunit5e-0962.8
NC_009641:448640:4486404486404498511212Staphylococcus aureus subsp. aureus str. Newman chromosome,type I restriction modification system, site specificity determination subunit5e-0962.8
NC_013450:412122:4136714136714148821212Staphylococcus aureus subsp. aureus ED98, complete genometype I restriction-modification system S subunit5e-0962.8
NC_017341:472685:4726854726854738961212Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,restriction endonuclease S subunit5e-0962.8
NC_017343:416834:4168344168344180451212Staphylococcus aureus subsp. aureus ECT-R 2, complete genometype I restriction modification DNA specificity domain protein5e-0962.8
NC_017347:469024:4690244690244702351212Staphylococcus aureus subsp. aureus T0131 chromosome, completeRestriction modification system DNA specificity domain protein5e-0962.8
NC_018876:587094:6087896087896100811293Methanolobus psychrophilus R15 chromosome, complete genometype I restriction-modification system, S subunit2e-0860.8
NC_009778:567000:5837195837195851701452Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-0859.7
NC_015953:4746983:4757318475731847586491332Streptomyces sp. SirexAA-E chromosome, complete genomeRestriction endonuclease S subunits-like protein5e-0859.3
NC_019907:773944:782100782100782702603Liberibacter crescens BT-1 chromosome, complete genomeType I restriction-modification system, specificity subunit S7e-0859.3
NC_008751:1043269:1053152105315210549391788Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain2e-0757.8
NC_016582:4874500:4891407489140748926301224Streptomyces bingchenggensis BCW-1 chromosome, complete genomerestriction modification system DNA specificity subunit2e-0757.8
NC_015562:755785:7636407636407649591320Methanotorris igneus Kol 5 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0757.4
NC_014220:1162948:1167996116799611692641269Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomerestriction modification system DNA specificity domain protein5e-0756.2
NC_015737:831792:8542308542308554021173Clostridium sp. SY8519, complete genomehypothetical protein5e-0756.2
NC_019902:1863162:1874009187400918753281320Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, specificity subunit S5e-0756.2
NC_014365:2810405:2832411283241128336461236Desulfarculus baarsii DSM 2075 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-0655.1
NC_009076:75535:915959159592542948Burkholderia pseudomallei 1106a chromosome I, complete sequenceRestriction endonuclease S subunits2e-0654.3
NC_008571:744500:7506847506847519401257Gramella forsetii KT0803, complete genometype I restriction-modification system DNA speci ficity subunit4e-0653.1