Pre_GI Gene

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Host: NC_012582 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012582:1976962 Vibrio cholerae O395 chromosome chromosome I, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
197696219800123051transporter AcrBDF familyQuickGO ontologyBLASTP
198062419818591236integrase phage familyQuickGO ontologyBLASTP
198254119859813441putative helicaseQuickGO ontologyBLASTP
198597219874231452hypothetical proteinBLASTP
19874201988154735chemotaxis protein MotB-related proteinQuickGO ontologyBLASTP
198814719902672121Restin-related proteinQuickGO ontologyBLASTP
199031219933803069putative type I restriction enzyme HsdRQuickGO ontologyBLASTP
199340819953991992hypothetical proteinBLASTP
199539219968041413hypothetical proteinBLASTP
199680519981931389hypothetical proteinBLASTP
199815020005312382putative DNA methylase HsdMQuickGO ontologyBLASTP
200067220027352064hypothetical proteinBLASTP
200271720063793663hypothetical proteinBLASTP
20064072007267861hypothetical proteinBLASTP
200733220084021071hypothetical proteinBLASTP
200841720095711155hypothetical proteinBLASTP