Pre_GI Gene

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Host: NC_008789 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008789:1237969 Halorhodospira halophila SL1, complete genome

Host Lineage: Halorhodospira halophila; Halorhodospira; Ectothiorhodospiraceae; Chromatiales; Proteobacteria; Bacteria

General Information: Halorhodospira halophila SL1 was isolated from salt lake mud. Sulfur-oxidizing extreme halophile. This organism, formerly Ectothiorhodospira halophila is alkaliphilic, phototrophic, halophile. This is one of the most halophilic eubacteria known, and produces organic solutes such as glycine betaine, ectoine, and trehalose to balance the osmotic pressure. This organism oxidizes sulfide to sulfur, which is deposited outside the cell and further oxidized to sulfate. This organism also produces a blue light sensor called photoactive yellow protein which is involved in signal transduction.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12379691238508540molybdenum cofactor biosynthesis protein BQuickGO ontologyBLASTP
12385141238654141hypothetical protein
123877512409732199AsmA family proteinQuickGO ontologyBLASTP
124097812420541077AG-specific adenine glycosylaseQuickGO ontologyBLASTP
12421361242408273FeII trafficking protein YggXQuickGO ontologyBLASTP
1242463124253876tRNA-PheQuickGO ontology
124281512440531239phage integrase family proteinQuickGO ontologyBLASTP
12445971244893297transposase IS3IS911 family proteinQuickGO ontologyBLASTP
12448711245713843Integrase catalytic regionQuickGO ontologyBLASTP
12457001246470771hypothetical protein
124656912491482580DEAD-like helicases-likeQuickGO ontologyBLASTP
12493011249816516hypothetical proteinBLASTP
12499281250713786hypothetical proteinBLASTP
125092512521031179hypothetical proteinBLASTP
125213412553133180protein of unknown function DUF450QuickGO ontologyBLASTP
125543312564371005hypothetical proteinBLASTP
125643412577231290restriction modification system DNA specificity domainQuickGO ontologyBLASTP
12577201258676957Abi family proteinQuickGO ontologyBLASTP
125883712608161980N-6 DNA methylaseQuickGO ontologyBLASTP