Pre_GI Gene

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Host: NC_016944 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016944:1937645 Vibrio cholerae IEC224 chromosome I, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
193764519387391095hypothetical proteinBLASTP
193873919417893051transporter AcrBDF family proteinQuickGO ontologyBLASTP
1942001194208888tRNA-SerQuickGO ontologyBLASTP
194240119436361236phage family integraseQuickGO ontologyBLASTP
19437741944187414phage integraseQuickGO ontologyBLASTP
194431819477673450hypothetical proteinBLASTP
194775819492091452hypothetical proteinBLASTP
19492061949940735chemotaxis protein MotB-likeproteinQuickGO ontologyBLASTP
194993319520532121hypothetical proteinBLASTP
195209819551573060type I restriction enzyme HsdRQuickGO ontologyBLASTP
195519419571851992hypothetical proteinBLASTP
195717819585901413hypothetical proteinBLASTP
195859119599191329type I restriction enzyme S subunitQuickGO ontologyBLASTP
195993619623172382type I restriction enzyme M proteinQuickGO ontologyBLASTP
196245819645212064hypothetical proteinBLASTP
196450319680753573hypothetical proteinBLASTP
19681931969053861hypothetical proteinBLASTP
196911819701881071hypothetical proteinBLASTP
197020319713571155N-acetylneuraminic acid mutarotaseQuickGO ontologyBLASTP