Pre_GI: BLASTP Hits

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Query: NC_016944:1937645:1944318 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1944318, End: 1947767, Length: 3450

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:1363831:1369410136941013728593450Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein02342
NC_012578:1838470:1845143184514318485923450Vibrio cholerae M66-2 chromosome I, complete sequenceputative helicase02342
NC_012582:1976962:1982541198254119859813441Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative helicase02330
NC_009457:1444449:1451122145112214545623441Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein02330
NC_002505:1892430:1898009189800919008312823Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehelicase, putative01908
NC_008577:4533574:4549096454909645525423447Shewanella sp. ANA-3 chromosome 1, complete sequenceSNF2-related protein01253
NC_012668:1688500:1746049174604917473201272Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein0831
NC_009434:1580205:1588219158821915912573039Pseudomonas stutzeri A1501, complete genomehelicase, putative0749
NC_007645:3756654:3767004376700437700153012Hahella chejuensis KCTC 2396, complete genomeSuperfamily II DNA/RNA helicase, SNF2 family0733
NC_009656:6224221:6232483623248362355153033Pseudomonas aeruginosa PA7 chromosome, complete genomeSNF2 family DNA/RNA helicase0720
NC_015588:939037:9360239360239390403018Isoptericola variabilis 225 chromosome, complete genomeSNF2-related protein4e-155549
NC_002505:1892430:190085119008511901459609Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-115417
NC_017075:1869326:1878336187833618821993864Rubrivivax gelatinosus IL144, complete genomeputative helicase/endonuclease3e-82307
NC_012918:1174412:1190671119067111944173747Geobacter sp. M21 chromosome, complete genomeSNF2-related protein4e-77290
NC_019940:1963000:1969129196912919720292901Thioflavicoccus mobilis 8321 chromosome, complete genomeDNA/RNA helicase3e-70268
NC_020260:603796:6103886103886136303243Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-68262
NC_009778:567000:5738125738125770543243Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-68261
NC_014652:1091610:1109840110984011126592820Caldicellulosiruptor hydrothermalis 108 chromosome, completesnf2-related protein2e-67258
NC_016830:5994494:6013571601357160168193249Pseudomonas fluorescens F113 chromosome, complete genomeSNF2 helicase2e-66254
NC_003902:1680414:1694211169421116961361926Xanthomonas campestris pv. campestris str. ATCC 33913, completehelicase3e-66254
NC_007086:3334000:3347629334762933495541926Xanthomonas campestris pv. campestris str. 8004, complete genomehelicase3e-66254
NC_017986:1885613:1915596191559619188473252Pseudomonas putida ND6 chromosome, complete genomenon-specific serine/threonine protein kinase3e-63244
NC_009512:5166459:5169632516963251728803249Pseudomonas putida F1, complete genomeNon-specific serine/threonine protein kinase3e-63244
NC_014010:175500:1894121894121928043393Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehypothetical protein6e-62240
NC_015580:293803:3071063071063106183513Novosphingobium sp. PP1Y, complete genomeSNF2-like protein3e-58227
NC_012489:209016:2246302246302280823453Gemmatimonas aurantiaca T-27, complete genomehelicase7e-58226
NC_017030:3771675:3778679377867937812552577Corallococcus coralloides DSM 2259 chromosome, complete genomeSNF2 domain/helicase domain-containing protein5e-56220
NC_015730:1799500:1817185181718518203613177Roseobacter litoralis Och 149 chromosome, complete genomeputative DNA helicase2e-55218
NC_008095:8837612:8846310884631088492942985Myxococcus xanthus DK 1622, complete genomeSNF2 domain/helicase domain protein1e-54215
NC_011757:3486283:3486283348628334893843102Methylobacterium chloromethanicum CM4, complete genomeNon-specific serine/threonine protein kinase9e-54213
NC_014479:3510972:3529547352954735323152769Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative ATP-binding SNF2 helicase or protein kinase2e-47191
NC_009725:3447336:3468057346805734708312775Bacillus amyloliquefaciens FZB42, complete genomeYwqA4e-47191
NC_016816:3974895:3983225398322539863533129Pantoea ananatis LMG 5342, complete genomeSNF2-related:Helicase-like protein6e-47190
NC_014366:2826575:2846239284623928488902652Gamma proteobacterium HdN1, complete genomePredicted helicase1e-46189
NC_014551:3515462:3534146353414635369202775Bacillus amyloliquefaciens DSM 7, complete genomeATP-binding SNF2 helicase or protein kinase1e-46189
NC_011725:5169135:5169135516913551718912757Bacillus cereus B4264 chromosome, complete genomehelicase9e-47189
NC_020410:3440327:3462194346219434649682775Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeATPase involved in RNA remodelling DNA recombination and repair8e-47189
NC_017191:3483231:3502981350298135057552775Bacillus amyloliquefaciens XH7 chromosome, complete genomeATP-binding SNF2 helicase or protein kinase2e-46188
NC_017188:3482500:3501318350131835040922775Bacillus amyloliquefaciens TA208 chromosome, complete genomeATP-binding SNF2 helicase or protein kinase2e-46188
NC_011658:5007691:5007691500769150104472757Bacillus cereus AH187 chromosome, complete genomeSNF2 family helicase4e-46187
NC_003909:4951444:4951444495144449542002757Bacillus cereus ATCC 10987, complete genomehelicase, putative8e-46186
NC_014815:3790050:3811100381110038145103411Micromonospora sp. L5 chromosome, complete genomesnf2-related protein9e-46186
NC_013093:1157476:1162498116249811655843087Actinosynnema mirum DSM 43827, complete genomeNon-specific serine/threonine protein kinase5e-45184
NC_014483:562594:5696915696915728163126Paenibacillus polymyxa E681 chromosome, complete genomeSuperfamily II DNA/RNA helicase, SNF2 family4e-44180
NC_019673:1275627:1275627127562712789713345Saccharothrix espanaensis DSM 44229 complete genomeSnf2/Rad54 family helicase2e-43178
NC_014622:653599:6605276605276636523126Paenibacillus polymyxa SC2 chromosome, complete genomesnf22e-43178
NC_016641:2225779:2232947223294722360723126Paenibacillus terrae HPL-003 chromosome, complete genomesuperfamily II DNA/RNA helicase3e-43177
NC_012793:3243727:3250973325097332537502778Geobacillus sp. WCH70, complete genomeNon-specific serine/threonine protein kinase4e-43177
NC_015690:632565:6342416342416372072967Paenibacillus mucilaginosus KNP414 chromosome, complete genomeSWF/SNF family helicase5e-43177
NC_021171:4549673:4555923455592345588742952Bacillus sp. 1NLA3E, complete genomeSNF2-like protein4e-42174
NC_016935:634500:6363796363796393422964Paenibacillus mucilaginosus 3016 chromosome, complete genomeSWF/SNF family helicase3e-42174
NC_013161:276000:2772182772182803613144Cyanothece sp. PCC 8802, complete genomeSNF2-related protein1e-41172
NC_009973:301391:3267223267223297873066Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completenon-specific serine/threonine protein kinase2e-40168
NC_009925:647752:6486906486906518723183Acaryochloris marina MBIC11017, complete genomehelicase, SNF2 family, putative4e-40167
NC_020302:1241504:1273272127327212763553084Corynebacterium halotolerans YIM 70093 = DSM 44683, completeDNA/RNA helicase6e-39163
NC_010322:5293652:5311797531179753136981902Pseudomonas putida GB-1 chromosome, complete genomenon-specific serine/threonine protein kinase6e-39163
NC_009482:2051890:2075338207533820783883051Synechococcus sp. RCC307 chromosome, complete genomeSNF2 family DNA/RNA helicase7e-39163
NC_020126:10117469:1011746910117469101204502982Myxococcus stipitatus DSM 14675, complete genomeSNF2/helicase domain-containing protein9e-39163
NC_007005:2149275:2163618216361821663622745Pseudomonas syringae pv. syringae B728a, complete genomeSNF2-related:Helicase, C-terminal:SWIM Zn-finger2e-38162
NC_010981:314745:3380193380193415553537Wolbachia pipientis, complete genomehelicase, SNF2 family1e-38162
NC_009481:2204629:2229205222920522324173213Synechococcus sp. WH 7803 chromosome, complete genomeSNF2 family DNA/RNA helicase1e-38162
NC_014330:195447:2257382257382287553018Brachyspira pilosicoli 95/1000 chromosome, complete genomeHepA Superfamily II D R helicase2e-38161
NC_016627:3205333:3248407324840732516973291Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA/RNA helicase3e-38161
NC_014972:3000138:3010901301090130149924092Desulfobulbus propionicus DSM 2032 chromosome, complete genomeSNF2-like protein5e-38160
NC_019940:2236630:2236630223663022397883159Thioflavicoccus mobilis 8321 chromosome, complete genomeDNA/RNA helicase6e-38160
NC_010674:2417199:2431174243117424343263153Clostridium botulinum B str. Eklund 17B, complete genomeimitation switch iswi2e-36155
NC_017243:1197586:1205298120529812083993102Brachyspira intermedia PWS/A chromosome, complete genomeHepA, Superfamily II D/R helicase, SNF2 family4e-36154
NC_008740:2905990:2924886292488629281463261Marinobacter aquaeolei VT8, complete genomeSNF2-related protein8e-36153
NC_016109:3875617:3880796388079638821211326Kitasatospora setae KM-6054, complete genomeputative truncated ATP-dependent helicase1e-35152
NC_016800:979494:1001218100121810043073090Corynebacterium diphtheriae BH8 chromosome, complete genomeputative DNA/RNA helicase4e-35151
NC_017317:944218:9442189442189473133096Corynebacterium ulcerans 809 chromosome, complete genomeATP-dependent helicase1e-34149
NC_015683:947048:9470489470489501433096Corynebacterium ulcerans BR-AD22 chromosome, complete genomeATP-dependent helicase1e-34149
NC_007973:499606:5208915208915239683078Ralstonia metallidurans CH34 chromosome 1, complete sequenceSNF2-related2e-34148
NC_014329:844622:8655118655118686063096Corynebacterium pseudotuberculosis FRC41 chromosome, completeATP-dependent helicase1e-33146
NC_016781:844613:8655028655028685973096Corynebacterium pseudotuberculosis 3/99-5 chromosome, completehelicase helZ1e-33146
NC_017031:863093:8653558653558684503096Corynebacterium pseudotuberculosis P54B96 chromosome, completeHelicase helZ1e-33146
NC_017300:863898:8654078654078685023096Corynebacterium pseudotuberculosis 1002 chromosome, completeHelicase helZ1e-33146
NC_017301:863500:8651298651298682243096Corynebacterium pseudotuberculosis C231 chromosome, completeHelicase helZ1e-33146
NC_017303:863060:8653228653228684173096Corynebacterium pseudotuberculosis I19 chromosome, complete genomeHelicase helZ1e-33146
NC_017305:863072:8653348653348684293096Corynebacterium pseudotuberculosis PAT10 chromosome, completeHelicase helZ1e-33146
NC_014008:3296708:3318654331865433217283075Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeSNF2-related protein2e-33145
NC_018720:311844:3134773134773169713495Bifidobacterium asteroides PRL2011 chromosome, complete genomehelicase2e-33145
NC_016932:832748:8536268536268567213096Corynebacterium pseudotuberculosis 316 chromosome, complete genomeHelicase helZ2e-33145
NC_018748:1311465:1326966132696613299803015Emticicia oligotrophica DSM 17448 chromosome, complete genomeSNF2-related protein1e-32142
NC_008027:2051821:2056923205692320597632841Pseudomonas entomophila L48, complete genomeDNA helicases, SNF2 family1e-32142
NC_009831:2884851:2902811290281129060833273Shewanella sediminis HAW-EB3, complete genomeNon-specific serine/threonine protein kinase4e-32141
NC_010814:243384:2647092647092666341926Geobacter lovleyi SZ, complete genomeNon-specific serine/threonine protein kinase6e-32140
NC_014393:1590893:1631067163106716343033237Clostridium cellulovorans 743B chromosome, complete genomeSNF2-related protein2e-31139
NC_013223:343344:3459653459653491533189Desulfohalobium retbaense DSM 5692, complete genomeSNF2-related protein3e-31138
NC_016751:1776669:1778274177827417812402967Marinitoga piezophila KA3 chromosome, complete genomeDNA/RNA helicase9e-31136
NC_008536:4921224:4938823493882349420443222Solibacter usitatus Ellin6076, complete genomeSNF2-related protein2e-29132
NC_019902:2306961:2328715232871523316122898Thioalkalivibrio nitratireducens DSM 14787, complete genomeHelicase, SNF2/RAD54 family2e-29132
NC_015711:237526:2516432516432551883546Myxococcus fulvus HW-1 chromosome, complete genomeSNF2/helicase domain-containing protein2e-29132
NC_017094:1703000:1705818170581817074491632Leptospirillum ferrooxidans C2-3, complete genomehelicase, Snf2 family1e-29132
NC_009348:1475955:1526141152614115299833843Aeromonas salmonicida subsp. salmonicida A449, complete genomeSWI/SNF family helicase1e-29132
NC_013441:382597:4177384177384212173480Gordonia bronchialis DSM 43247, complete genomeSNF2-related protein4e-29131
NC_008570:3220539:3220539322053932243813843Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeSNF2 family helicase9e-29129
NC_020126:4974877:4994019499401949975883570Myxococcus stipitatus DSM 14675, complete genomeSNF2/helicase domain-containing protein3e-28128
NC_014151:3687612:3687612368761236909023291Cellulomonas flavigena DSM 20109 chromosome, complete genomeSNF2-related protein5e-28127
NC_013204:2305140:2323610232361023268793270Eggerthella lenta DSM 2243, complete genomeNon-specific serine/threonine protein kinase2e-27125
NC_014550:615609:6371086371086404553348Arthrobacter arilaitensis Re117, complete genomeputative ATP-dependent helicase1e-26122
NC_015634:2492771:2513066251306625160442979Bacillus coagulans 2-6 chromosome, complete genomeSNF2 helicase associated domain-containing protein7e-26120
NC_015687:3470829:3470829347082934740623234Clostridium acetobutylicum DSM 1731 chromosome, complete genomeSNF2 family DNA/RNA helicase8e-25116
NC_003030:3465352:3469203346920334724363234Clostridium acetobutylicum ATCC 824, complete genomeSuperfamily II DNA/RNA helicases, SNF2 family8e-25116
NC_020302:2829484:2838393283839328411972805Corynebacterium halotolerans YIM 70093 = DSM 44683, completesuperfamily II DNA/RNA helicase, SNF2 family protein3e-1998.2
NC_014033:2080818:2097225209722520993662142Prevotella ruminicola 23 chromosome, complete genomeSNF2 helicase family protein4e-1894.7
NC_009077:874164:8851148851148884823369Mycobacterium sp. JLS, complete genomeSNF2-related protein2e-1689
NC_015510:6842692:6862351686235168649722622Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeSNF2-like protein6e-1687.4
NC_011899:948790:9524469524469538491404Halothermothrix orenii H 168, complete genomehelicase domain protein1e-1483.2
NC_017167:1648913:1650108165010816518261719Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1SNF2-related protein2e-1378.6
NC_008435:604772:6114046114046142952892Rhodopseudomonas palustris BisA53, complete genomeSNF2-related protein3e-1275.1
NC_008463:5246954:5272663527266352746361974Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative DNA helicase4e-1274.7
NC_011420:69843:8433284332872082877Rhodospirillum centenum SW, complete genomehelicase, SNF2 family, putative5e-1274.3
NC_009656:4527457:4599706459970646016821977Pseudomonas aeruginosa PA7 chromosome, complete genomeSNF2 family helicase7e-1273.9
NC_015975:558523:5766125766125787622151Lactobacillus ruminis ATCC 27782 chromosome, complete genomeSNF2 family DNA/RNA helicase8e-1273.6
NC_017301:1261167:1261167126116712639292763Corynebacterium pseudotuberculosis C231 chromosome, completeSNF2 family DNA/RNA helicase1e-1173.6
NC_014329:1261480:1261480126148012642422763Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-1173.2
NC_016781:1261300:1261300126130012640622763Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeSNF2 family DNA/RNA helicase1e-1173.2
NC_017031:1261289:1261289126128912640512763Corynebacterium pseudotuberculosis P54B96 chromosome, completeSNF2 family DNA/RNA helicase1e-1173.2
NC_017300:1258861:1258861125886112616232763Corynebacterium pseudotuberculosis 1002 chromosome, completeSNF2 family DNA/RNA helicase1e-1173.2
NC_017303:1261311:1261311126131112640732763Corynebacterium pseudotuberculosis I19 chromosome, complete genomeSNF2 family DNA/RNA helicase1e-1173.2
NC_017305:1258840:1258840125884012616022763Corynebacterium pseudotuberculosis PAT10 chromosome, completeSNF2 family DNA/RNA helicase1e-1173.2
NC_011004:4073916:4083777408377740866622886Rhodopseudomonas palustris TIE-1, complete genomeSNF2-related protein2e-1172.4
NC_018080:5091772:5119381511938151213511971Pseudomonas aeruginosa DK2 chromosome, complete genomeDNA helicase2e-1172.4
NC_004129:5373886:5396984539698453989361953Pseudomonas fluorescens Pf-5, complete genomehelicase, SNF2 family2e-1172
NC_002570:1041342:1041342104134210430751734Bacillus halodurans C-125, complete genomeSNF2 helicase4e-1171.6
NC_011662:1041725:1046692104669210496192928Thauera sp. MZ1T, complete genomeSNF2-related protein5e-1170.9
NC_015731:1:5350535082532904Nitrosomonas sp. Is79A3 chromosome, complete genomeSNF2-like protein3e-1068.2
NC_003902:624828:6323726323726352752904Xanthomonas campestris pv. campestris str. ATCC 33913, completehelicase4e-1068.2
NC_010688:605018:6125626125626154652904Xanthomonas campestris pv. campestris, complete genomeputative DNA-binding protein4e-1068.2
NC_007086:626891:6344356344356373382904Xanthomonas campestris pv. campestris str. 8004, complete genomehelicase4e-1068.2
NC_021184:3174500:3175728317572831773921665Desulfotomaculum gibsoniae DSM 7213, complete genomeDNA/RNA helicase, superfamily II, SNF2 family6e-1067.4
NC_007626:959684:9724289724289747102283Magnetospirillum magneticum AMB-1, complete genomeSuperfamily II DNA/RNA helicase6e-0757.4