Pre_GI: BLASTP Hits

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Query: NC_001263:243000:245486 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 245486, End: 247498, Length: 2013

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011661:1175743:1174647117464711757501104Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator1e-33145
NC_008570:236500:2374942374942386091116Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative transport system permease abc transporter protein8e-30132
NC_013517:1249466:1253897125389712549611065Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator9e-30132
NC_013517:1916020:1923299192329919243631065Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator9e-30132
NC_008262:1721496:1737591173759117386881098Clostridium perfringens SM101, complete genomeABC transporter (permease proteins)-like protein lmo13903e-28127
NC_015500:78223:7973679736807791044Treponema brennaborense DSM 12168 chromosome, complete genomeABC-type transporter, integral membrane subunit2e-26121
NC_009012:1901492:1910020191002019111381119Clostridium thermocellum ATCC 27405, complete genomeinner-membrane translocator2e-26121
NC_016627:1960097:1968797196879719699151119Clostridium clariflavum DSM 19732 chromosome, complete genomeABC transporter permease5e-26120
NC_015152:2622000:2635976263597626370881113Spirochaeta sp. Buddy chromosome, complete genomeABC transporter inner membrane protein3e-25117
NC_010723:2873886:2879822287982228809761155Clostridium botulinum E3 str. Alaska E43, complete genomeABC transporter, permease protein1e-24115
NC_010674:3049500:3056417305641730575711155Clostridium botulinum B str. Eklund 17B, complete genomeABC transporter, permease protein1e-24115
NC_013517:825100:8265988265988276861089Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator3e-24114
NC_015425:604842:6120066120066130821077Clostridium botulinum BKT015925 chromosome, complete genomesugar ABC transporter permease1e-23111
NC_008593:555463:5614955614955625711077Clostridium novyi NT, complete genomeBranched-chain amino acid transport system / permease component superfamily, putative4e-23110
NC_009617:3647500:3652264365226436533911128Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator7e-23109
NC_015555:1989463:2008288200828820093431056Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, integral membrane subunit2e-22108
NC_009617:4761000:4767914476791447690411128Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator3e-22107
NC_019970:2263427:2280233228023322812881056Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeABC-type uncharacterized transport system, permease component2e-21105
NC_013205:19295:4301743017440901074Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,inner-membrane translocator1e-20102
NC_013169:805124:8038448038448051271284Kytococcus sedentarius DSM 20547, complete genomenucleoside ABC transporter membrane protein8e-1892.8
NC_013192:664408:6700456700456711121068Leptotrichia buccalis DSM 1135, complete genomeinner-membrane translocator2e-1791.3
NC_014614:432000:4392694392694403301062Clostridium sticklandii, complete genomeYufP1e-1688.6
NC_008212:1685367:1694022169402216951131092Haloquadratum walsbyi DSM 16790, complete genomeABC-type ribose transport system, permease protein6e-1686.7
NC_014364:111000:1256021256021267171116Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeinner-membrane translocator7e-1582.8
NC_014364:815346:8762108762108772531044Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeinner-membrane translocator3e-1480.9
NC_008710:703740:7200767200767212271152Borrelia turicatae 91E135, complete genomenucleoside transport system permease protein6e-1479.7
NC_020291:5093138:5103323510332351045431221Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomenucleoside ABC transporter membrane protein3e-1377.8
NC_020291:1810527:1821906182190618231261221Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesugar ABC transporter, permease protein3e-1377.4
NC_017079:261736:2973132973132984311119Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeABC transporter permease4e-1377
NC_010673:703816:7226587226587238091152Borrelia hermsii DAH, complete genomenucleoside transport system permease protein6e-1376.6
NC_016633:14000:1823718237192591023Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeABC transporter permease7e-1376.3
NC_013967:1878045:1878045187804518791751131Haloferax volcanii DS2 chromosome, complete genomeABC-type transport system permease protein (probable substrate sugar)2e-1274.7
NC_014614:1259236:1272508127250812735721065Clostridium sticklandii, complete genomeABC transporter, permease3e-1274.3
NC_012225:1775264:1792295179229517934101116Brachyspira hyodysenteriae WA1, complete genomeinner-membrane-translocator6e-1273.2
NC_017243:314000:3156913156913168061116Brachyspira intermedia PWS/A chromosome, complete genomeinner-membrane-translocator7e-1273.2
NC_014330:1957725:1976699197669919778201122Brachyspira pilosicoli 95/1000 chromosome, complete genomeinner-membrane translocator5e-1170.1
NC_013171:312500:3317783317783329441167Anaerococcus prevotii DSM 20548, complete genomeinner-membrane translocator6e-1169.7
NC_007802:1240989:1260529126052912615721044Jannaschia sp. CCS1, complete genomeinner-membrane translocator8e-1169.3
NC_010723:3499291:3509005350900535100661062Clostridium botulinum E3 str. Alaska E43, complete genomesugar ABC transporter, permease protein2e-1068.6
NC_014168:994640:9972819972819983541074Segniliparus rotundus DSM 44985 chromosome, complete genomeinner-membrane translocator2e-1068.2
NC_012785:1960500:1963226196322619642631038Kosmotoga olearia TBF 19.5.1, complete genomeinner-membrane translocator2e-1067.8
NC_008054:1815723:1834159183415918352981140Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeABC transporter, permease protein6e-1066.6
NC_009012:1901492:191113919111391912074936Clostridium thermocellum ATCC 27405, complete genomeinner-membrane translocator2e-0964.7
NC_016627:1960097:196786219678621968797936Clostridium clariflavum DSM 19732 chromosome, complete genomeABC transporter permease5e-0963.5
NC_014363:1396912:1420413142041314215311119Olsenella uli DSM 7084 chromosome, complete genomenucleoside ABC transporter membrane protein1e-0862
NC_016751:1524848:1536238153623815373921155Marinitoga piezophila KA3 chromosome, complete genomeABC transporter permease1e-0862
NC_009376:1442314:1442314144231414433181005Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeinner-membrane translocator3e-0860.8
NC_014150:1123570:1128252112825211293671116Brachyspira murdochii DSM 12563 chromosome, complete genomeinner-membrane translocator4e-0860.5
NC_014328:3294086:3306387330638733074751089Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ABC transporter permease4e-0860.5
NC_008600:3611038:3627215362721536282731059Bacillus thuringiensis str. Al Hakam, complete genomeABC transporter, permease6e-0859.7
NC_012472:3625800:3645222364522236462801059Bacillus cereus 03BB102, complete genomesugar ABC transporter, permease protein6e-0859.7
NC_017200:3622838:3642152364215236432101059Bacillus thuringiensis serovar finitimus YBT-020 chromosome,sugar ABC transporter permease2e-0758.5
NC_011985:1831961:1853200185320018542941095Agrobacterium radiobacter K84 chromosome 1, complete genomesugar ABC transporter3e-0757.8
NC_017075:4880807:488190048819004882868969Rubrivivax gelatinosus IL144, complete genomeputative ABC transporter permease3e-0757.8
NC_017075:4880807:4880807488080748819071101Rubrivivax gelatinosus IL144, complete genomeputative ABC transporter permease3e-0757.8
NC_010001:986500:9901339901339912331101Clostridium phytofermentans ISDg, complete genomeinner-membrane translocator3e-0757.4
NC_014614:432000:440820440820441233414Clostridium sticklandii, complete genomesugar ABC transporter, permease protein (fragment)6e-0756.6
NC_010725:4618000:4631792463179246329341143Methylobacterium populi BJ001, complete genomeinner-membrane translocator6e-0756.6
NC_015856:268034:2696852696852707911107Collimonas fungivorans Ter331 chromosome, complete genomeputative transmembrane ABC transporter protein6e-0756.6
NC_013517:3846747:3852715385271538537461032Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator2e-0655.1
NC_015315:1458803:1460898146089814619051008Thermoproteus uzoniensis 768-20 chromosome, complete genomeinner-membrane translocator3e-0654.3
NC_015555:1989463:200736820073682008291924Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, integral membrane subunit7e-0653.1