Pre_GI Gene

Some Help

Host: NC_014323 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014323:992978 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
992978993697720bacteriophage-related terminaseQuickGO ontologyBLASTP
9936979947401044major capsid Bacteriophage phi CTX proteinQuickGO ontologyBLASTP
994790995632843phage-related capsid scaffold bacteriophage proteinQuickGO ontologyBLASTP
9957769975571782DNA-dependent ATPase terminase subunitQuickGO ontologyBLASTP
9975579986091053bacteriophage capsid portal protein proteinQuickGO ontologyBLASTP
998612998824213hypothetical protein
999019999396378receiver domain-containing proteinQuickGO ontologyBLASTP
999413999790378hypothetical protein
9999521000674723hypothetical proteinBLASTP
10006791001266588hypothetical proteinBLASTP
10012691001628360hypothetical proteinBLASTP
10016121002118507hypothetical proteinBLASTP
10021181002531414hypothetical proteinBLASTP
10026901002863174hypothetical protein
100295610040711116hypothetical proteinBLASTP
10040561004715660hypothetical proteinBLASTP
10049851005383399hypothetical protein
100538310064171035AraC family transcription regulator proteinQuickGO ontologyBLASTP
100654610082161671acetyl-coenzyme A synthetaseQuickGO ontologyBLASTP
100826510090297653-hydroxyacyl-CoA short-chain dehydrogenase type II oxidoreductaseQuickGO ontologyBLASTP
100910810103101203acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
101034710114951149acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
10115911012514924nitrilase regulator proteinQuickGO ontologyBLASTP
101298310140321050aldoxime dehydrataseQuickGO ontologyBLASTP
101405810152991242cobalamin synthesis P47K proteinQuickGO ontologyBLASTP
10152961015955660nitrile hydratase subunit betaQuickGO ontologyBLASTP
10160171016616600nitrile hydratase subunit alphaQuickGO ontologyBLASTP
101668710182011515amidase family proteinQuickGO ontologyBLASTP
10186551019566912quinohemoprotein alcohol dehydrogenaseQuickGO ontologyBLASTP
10199931020475483truncated hemoglobin-like proteinQuickGO ontologyBLASTP
10208911021841951quinohemoprotein alcohol dehydrogenaseQuickGO ontologyBLASTP
102201410232611248acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
102369610247481053AraC family transcription regulator proteinQuickGO ontologyBLASTP
1025779102750617282-isopropylmalate synthaseQuickGO ontologyBLASTP
10277811028596816AraC family transcription regulator proteinQuickGO ontologyBLASTP
102893410317202787VGR-related proteinQuickGO ontologyBLASTP
103171710334501734hypothetical proteinBLASTP
10334471034055609hypothetical protein
10340951034361267hypothetical proteinBLASTP