Pre_GI: BLASTP Hits

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Query: NC_014323:992978:1011591 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 1011591, End: 1012514, Length: 924

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012791:2233098:225195022519502252867918Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, AraC family2e-49196
NC_010623:1961685:1973975197397519750391065Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family4e-38158
NC_014931:3642779:364471236447123645674963Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, AraC family2e-25116
NC_011000:2831183:284490528449052845858954Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein3e-22105
NC_014323:992978:1023696102369610247481053Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein4e-22105
NC_011881:89705:1018661018661028671002Arthrobacter chlorophenolicus A6 plasmid pACHL02, completetranscriptional regulator, AraC family1e-1687.4
NC_007802:3807500:3819336381933638203491014Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family1e-1584.3
NC_003888:5443832:5452526545252654536231098Streptomyces coelicolor A3(2), complete genomearaC family regulatory protein2e-1479.7
NC_020302:85821:134949134949135863915Corynebacterium halotolerans YIM 70093 = DSM 44683, completetranscriptional regulator, AraC family protein3e-1376.3
NC_009921:8147947:815632781563278157223897Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family1e-1273.9
NC_016514:2079975:210364421036442104552909Enterobacter cloacae EcWSU1 chromosome, complete genometranscriptional activator feaR4e-1272.4
NC_013595:8603188:8612964861296486139921029Streptosporangium roseum DSM 43021, complete genomeAraC family transcriptional regulator1e-1170.9
NC_015410:3093465:315460531546053155408804Pseudomonas mendocina NK-01 chromosome, complete genomeDNA-binding transcriptional activator FeaR2e-1066.6
NC_019940:3089884:310140831014083102406999Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator2e-1066.2
NC_007511:3512100:3512100351210035131341035Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family4e-1065.5
NC_015733:2581324:260258326025832603554972Pseudomonas putida S16 chromosome, complete genomehypothetical protein9e-0961.2
NC_018870:354164:3720013720013733231323Thermacetogenium phaeum DSM 12270 chromosome, complete genometranscriptional regulator, AraC family1e-0860.8
NC_010515:2111691:214664121466412147621981Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-0860.5
NC_008543:2220698:225640822564082257346939Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-0860.5
NC_008061:190287:222318222318223256939Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-0860.5
NC_003228:2473956:248823224882322489044813Bacteroides fragilis NCTC 9343, complete genomeputative AraC family transcriptional regulatory protein2e-0860.1
NC_016776:2549465:256302525630252563837813Bacteroides fragilis 638R, complete genomeAraC family transcriptional regulator2e-0860.1
NC_007508:2072738:209256320925632093486924Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, AraC family3e-0859.7
NC_010725:750911:774638774638775594957Methylobacterium populi BJ001, complete genometranscriptional regulator, AraC family3e-0859.7
NC_016114:7282882:7291086729108672921051020Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeAraC family transcriptional regulator2e-0859.7
NC_015953:4746983:4763337476333747643651029Streptomyces sp. SirexAA-E chromosome, complete genomeHelix-turn-helix, AraC domain-containing protein7e-0858.2
NC_007677:71532:8496684966873742409Salinibacter ruber DSM 13855, complete genomesensor histidine kinase with multiple PAS and a response regulator receiver domain8e-0858.2
NC_015259:485015:557853557853558812960Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAraC-family transcriptional regulator9e-0857.8
NC_016048:1390463:141590514159051416759855Oscillibacter valericigenes Sjm18-20, complete genomeputative AraC family transcriptional regulator1e-0757.4
NC_014828:1632000:163896916389691639835867Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, AraC family2e-0756.6
NC_003155:883500:891284891284892279996Streptomyces avermitilis MA-4680, complete genomeAraC-family transcriptional regulator2e-0756.6
NC_013162:1176000:1181076118107611851194044Capnocytophaga ochracea DSM 7271, complete genomehistidine kinase3e-0756.2
NC_010170:1580832:158669015866901587673984Bordetella petrii, complete genometranscriptional regulator, AraC family6e-0755.1
NC_007951:3655088:365508836550883656071984Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, AraC family6e-0755.1
NC_008061:190287:217020217020217970951Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family6e-0755.1
NC_010515:2111691:214134321413432142293951Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, AraC family6e-0755.1
NC_015563:4206112:422286042228604223852993Delftia sp. Cs1-4 chromosome, complete genomeAraC family transcriptional regulator6e-0755.1
NC_015559:3511231:351357435135743514419846Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_014973:243000:247572247572248330759Geobacter sp. M18 chromosome, complete genometwo component AraC family transcriptional regulator1e-0653.9
NC_015733:2963548:296354829635482964501954Pseudomonas putida S16 chromosome, complete genometranscriptional regulator1e-0653.9
NC_015376:3320818:334116233411623342130969Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, AraC family3e-0652.8
NC_010501:3671517:3690878369087836920471170Pseudomonas putida W619, complete genometranscriptional regulator, AraC family4e-0652.4
NC_003888:8594500:860753986075398608480942Streptomyces coelicolor A3(2), complete genometranscriptional regulator4e-0652.4
NC_014814:3364336:337792233779223378278357Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, AraC family5e-0652
NC_016935:4117485:418696441869644187827864Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator9e-0651.2
NC_015690:4361000:442089344208934421756864Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator9e-0651.2