Pre_GI: BLASTP Hits

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Query: NC_014323:992978:1014058 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 1014058, End: 1015299, Length: 1242

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016906:839406:8493838493838506181236Gordonia polyisoprenivorans VH2 chromosome, complete genomeCobW family protein1e-122440
NC_010322:6037566:6039201603920160404061206Pseudomonas putida GB-1 chromosome, complete genomecobalamin synthesis protein P47K2e-117423
NC_015554:4648919:4653280465328046545301251Alteromonas sp. SN2 chromosome, complete genomecobalamin synthesis protein, P47K3e-106385
NC_013956:4627890:4629634462963446308661233Pantoea ananatis LMG 20103 chromosome, complete genomeYeiR6e-103374
NC_015276:565701:5675995675995688101212Marinomonas mediterranea MMB-1 chromosome, complete genomecobalamin synthesis protein P47K6e-99361
NC_009792:923155:9231559231559243781224Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-96353
NC_020181:527592:5372205372205384431224Enterobacter aerogenes EA1509E, complete genomePutative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family1e-96353
NC_014915:2963500:3009608300960830107921185Geobacillus sp. Y412MC52 chromosome, complete genomecobalamin synthesis protein P47K3e-91335
NC_013889:2561381:2561381256138125626311251Thioalkalivibrio sp. K90mix chromosome, complete genomecobalamin synthesis protein P47K8e-90331
NC_014391:4617688:4622115462211546233411227Micromonospora aurantiaca ATCC 27029 chromosome, complete genomecobalamin synthesis protein P47K9e-90330
NC_017338:436711:4515014515014527031203Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeputative GTPases (G3E family)5e-89328
NC_007622:416000:4350924350924362941203Staphylococcus aureus RF122, complete genomehypothetical protein1e-88327
NC_016941:433000:4466794466794478811203Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative cobalamin synthesis protein2e-88326
NC_010079:458940:4746874746874758891203Staphylococcus aureus subsp. aureus USA300_TCH1516, completecobalamin (vitamin B12) biosynthesis protein4e-88325
NC_007793:459045:4747924747924759941203Staphylococcus aureus subsp. aureus USA300, complete genomeputative cobalamin synthesis protein4e-88325
NC_009641:448640:4643884643884655901203Staphylococcus aureus subsp. aureus str. Newman chromosome,cobalamin synthesis protein4e-88325
NC_017341:472685:4876064876064888081203Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative GTPases (G3E family)4e-88325
NC_017347:469024:4839564839564851581203Staphylococcus aureus subsp. aureus T0131 chromosome, completeCobalamin synthesis protein4e-88325
NC_002758:475516:4926524926524938541203Staphylococcus aureus subsp. aureus Mu50, complete genomeputative cobalamin synthesis protein3e-88325
NC_002745:450000:4681374681374693391203Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein3e-88325
NC_009487:486000:5033985033985046001203Staphylococcus aureus subsp. aureus JH9 chromosome, completecobalamin synthesis protein, P47K3e-88325
NC_009632:486331:5034685034685046701203Staphylococcus aureus subsp. aureus JH1 chromosome, completecobalamin synthesis protein P47K3e-88325
NC_013450:412122:4292584292584304601203Staphylococcus aureus subsp. aureus ED98, complete genomecobalamin synthesis protein, putative3e-88325
NC_017343:416834:4324224324224336241203Staphylococcus aureus subsp. aureus ECT-R 2, complete genomecobW/HypB/UreG, nucleotide-binding domain protein3e-88325
NC_017351:452000:4655514655514667531203Staphylococcus aureus subsp. aureus 11819-97 chromosome, completecobW/HypB/UreG, nucleotide-binding domain protein1e-87323
NC_009952:2752500:2757530275753027587411212Dinoroseobacter shibae DFL 12, complete genomeputative 47 kDa protein2e-87322
NC_009668:1591290:1605913160591316071181206Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencecobalamin synthesis protein P47K7e-87321
NC_019904:3216416:3216416321641632176121197Echinicola vietnamensis DSM 17526 chromosome, complete genomeGTPase, G3E family2e-86320
NC_013118:1109610:1124916112491611261181203Brucella microti CCM 4915 chromosome 2, complete genomecobalamin synthesis protein/P47K family protein3e-86319
NC_015858:1150446:1165530116553011667321203Brucella pinnipedialis B2/94 chromosome chromosome 2, completecobalamin synthesis protein/P47K family protein4e-86318
NC_010167:1287000:1305606130560613068081203Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein4e-86318
NC_004311:1096649:1111977111197711131791203Brucella suis 1330 chromosome II, complete sequencecobalamin synthesis protein/P47K family protein4e-86318
NC_010104:1096081:1111408111140811126101203Brucella canis ATCC 23365 chromosome II, complete sequence47 kDa protein1e-85317
NC_007624:1046500:1061845106184510630471203Brucella melitensis biovar Abortus 2308 chromosome II, completeATP/GTP-binding site motif A (P-loop):Cobalamin synthesis protein/P47K1e-85317
NC_010740:1051000:1066346106634610675481203Brucella abortus S19 chromosome 2, complete sequenceCobalamin synthesis protein/P47K1e-85317
NC_003318:183914:1862081862081874101203Brucella melitensis 16M chromosome II, complete sequenceLOW AFFINITY ZINC TRANSPORT MEMBRANE PROTEIN1e-85317
NC_006933:1051873:1067089106708910682911203Brucella abortus biovar 1 str. 9-941 chromosome II, completecobalamin synthesis protein/P47K family protein1e-85317
NC_006677:2402282:2426805242680524280071203Gluconobacter oxydans 621H, complete genomehypothetical protein2e-85316
NC_015259:1803266:1818298181829818195001203Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTransposase IS116/IS110/IS902 family protein9e-83307
NC_020388:1582817:1584127158412715853441218Natronomonas moolapensis 8.8.11 complete genomeCobW domain protein3e-72272
NC_007426:1134937:1150596115059611518821287Natronomonas pharaonis DSM 2160, complete genomehypothetical protein6e-70265
NC_016048:1390463:1399475139947514006021128Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-65250
NC_015311:1612366:1635806163580616370141209Prevotella denticola F0289 chromosome, complete genomeCobW/P47K family protein1e-61237
NC_016048:797762:8198458198458209631119Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein8e-61234
NC_014370:1117283:1117283111728311185481266Prevotella melaninogenica ATCC 25845 chromosome chromosome I,CobW/P47K family protein7e-60231
NC_014933:3791840:3812963381296338141621200Bacteroides helcogenes P 36-108 chromosome, complete genomecobalamin synthesis protein P47K4e-57222
NC_020388:1582817:1582817158281715841271311Natronomonas moolapensis 8.8.11 complete genomeCobW domain protein3e-56219
NC_016048:1390463:1402284140228414034081125Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein7e-41168
NC_009481:1638394:1656788165678816578791092Synechococcus sp. WH 7803 chromosome, complete genomeG3E family GTPase8e-39161
NC_005070:2374850:2384966238496623863481383Synechococcus sp. WH 8102, complete genomehypothetical protein3e-37156
NC_009937:4350132:435322143532214354210990Azorhizobium caulinodans ORS 571, complete genomeputative cobalamin synthesis protein3e-37156
NC_008319:1376938:1390388139038813914671080Synechococcus sp. CC9311, complete genomepossible CobW protein involved in cobalamin synthesis4e-36152
NC_015186:1504275:152879115287911529753963Acidiphilium multivorum AIU301, complete genomeputative cobalamin synthesis protein3e-35149
NC_005956:1455496:1455496145549614565241029Bartonella henselae str. Houston-1, complete genomehypothetical protein3e-35149
NC_007516:1439537:1441964144196414430821119Synechococcus sp. CC9605, complete genomehypothetical protein4e-35149
NC_015733:3736104:3771298377129837723801083Pseudomonas putida S16 chromosome, complete genomeputative CobW protein involved in cobalamin synthesis2e-34146
NC_015733:2658337:267535726753572676310954Pseudomonas putida S16 chromosome, complete genomecobalamin synthesis protein P47K1e-32140
NC_004459:1:113111312117987Vibrio vulnificus CMCP6 chromosome I, complete sequencePutative GTPase2e-30133
NC_006513:1379735:1388949138894913900191071Azoarcus sp. EbN1, complete genomehypothetical protein, putative GTPase7e-29128
NC_013194:1040197:1041851104185110429181068Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completecobalamin synthesis protein P47K1e-28127
NC_008312:1600000:1602686160268616037321047Trichodesmium erythraeum IMS101, complete genomecobalamin biosynthesis protein CobW3e-28126
NC_009792:923155:9295219295219307201200Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-28125
NC_020181:527592:5435865435865447851200Enterobacter aerogenes EA1509E, complete genomePutative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family5e-28125
NC_010546:1175979:1190088119008811911281041Cyanothece sp. ATCC 51142 chromosome circular, complete sequencecobalamin biosynthesis protein/P47K3e-27123
NC_007513:1159497:1178767117876711798761110Synechococcus sp. CC9902, complete genomeputative cobalamin synthesis protein4e-27122
NC_007348:2558500:257851225785122579468957Ralstonia eutropha JMP134 chromosome 2, complete sequenceCobalamin synthesis protein/P47K:Cobalamin synthesis CobW, C-terminal2e-26120
NC_007643:791500:7937407937407947921053Rhodospirillum rubrum ATCC 11170, complete genomecobalamin synthesis CobW protein5e-26119
NC_009837:127000:1296091296091308021194Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequencehypothetical protein1e-25117
NC_011747:115864:1158641158641170571194Escherichia coli S88 plasmid pECOS88, complete sequenceconserved hypothetical protein; putative GTPase1e-25117
NC_008817:709370:7257947257947268461053Prochlorococcus marinus str. MIT 9515, complete genomeputative cobalamin synthesis protein6e-24112
NC_011294:4604283:461851746185174619473957Salmonella enterica subsp. enterica serovar Enteritidis strGTP-binding protein YjiA6e-24112
NC_011274:4577402:459176845917684592724957Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91GTP-binding protein YjiA6e-24112
NC_011205:4761598:477582447758244776780957Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853GTP-binding protein YjiA6e-24112
NC_009832:622969:644582644582645544963Serratia proteamaculans 568, complete genomecobalamin synthesis protein P47K1e-23111
NC_016831:4556761:457112745711274572083957Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein9e-24111
NC_009925:6024888:6026770602677060278311062Acaryochloris marina MBIC11017, complete genomecobalamin biosynthesis protein CobW2e-23110
NC_004431:1211000:1217510121751012187721263Escherichia coli CFT073, complete genomehypothetical protein3e-23110
NC_016641:4151403:4151403415140341524941092Paenibacillus terrae HPL-003 chromosome, complete genomecobalamin synthesis protein p47k3e-23110
NC_007946:1119000:1125513112551311267751263Escherichia coli UTI89, complete genomehypothetical protein3e-23109
NC_003552:5402000:5406278540627854077471470Methanosarcina acetivorans C2A, complete genomehypothetical protein4e-23109
NC_008253:334467:3374423374423387041263Escherichia coli 536, complete genomeputative cobalamin synthesis protein4e-23109
NC_015566:547387:571169571169572131963Serratia sp. AS12 chromosome, complete genomecobalamin synthesis protein P47K2e-22107
NC_015567:547500:571355571355572317963Serratia sp. AS9 chromosome, complete genomecobalamin synthesis protein P47K2e-22107
NC_017986:4790482:4815015481501548161091095Pseudomonas putida ND6 chromosome, complete genomecobalamin synthesis protein1e-22107
NC_010161:2548254:2574558257455825756281071Bartonella tribocorum CIP 105476, complete genomehypothetical protein5e-22105
NC_012658:1617902:162569916256991626628930Clostridium botulinum Ba4 str. 657 chromosome, complete genomeCobW/P47K family protein1e-21104
NC_004129:5781413:578444857844485785374927Pseudomonas fluorescens Pf-5, complete genomecobalamin synthesis protein/P47K family protein1e-21104
NC_002927:506183:5118095118095128191011Bordetella bronchiseptica RB50, complete genomehypothetical protein3e-21103
NC_010468:4059436:406555740655574066513957Escherichia coli ATCC 8739, complete genomecobalamin synthesis protein P47K6e-21102
NC_018876:2628966:2635117263511726363881272Methanolobus psychrophilus R15 chromosome, complete genomecobalamin synthesis protein, P47K6e-21102
NC_012880:1091486:109674010967401097702963Dickeya dadantii Ech703, complete genomecobalamin synthesis protein P47K7e-21102
NC_002928:507749:5133735133735143831011Bordetella parapertussis 12822, complete genomehypothetical protein1e-20101
NC_011985:3380842:3382498338249833836731176Agrobacterium radiobacter K84 chromosome 1, complete genomecobalamin synthesis protein1e-20101
NC_014664:1669642:1669642166964216706761035Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomecobalamin biosynthesis protein CobW2e-20100
NC_002570:388000:395900395900396835936Bacillus halodurans C-125, complete genomehypothetical protein3e-20100
NC_010505:5077162:507877250787725079764993Methylobacterium radiotolerans JCM 2831, complete genomecobalamin synthesis protein P47K7e-2098.6
NC_012438:565419:580206580206581138933Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomecobalamin synthesis protein/P47K2e-1997.4
NC_003552:5402000:5408234540823454095891356Methanosarcina acetivorans C2A, complete genomeCobW protein6e-1995.5
NC_009142:827912:8473758473758486881314Saccharopolyspora erythraea NRRL 2338, complete genomecobalamin synthesis CobW-like protein1e-1791.3
NC_013739:2106662:213646321364632137458996Conexibacter woesei DSM 14684, complete genomecobalamin synthesis protein P47K1e-1790.9
NC_003552:5402000:5417074541707454181771104Methanosarcina acetivorans C2A, complete genomecobalamin biosynthesis protein3e-1686.3
NC_012660:2143376:215743921574392158428990Pseudomonas fluorescens SBW25 chromosome, complete genomeputative cobalamin biosynthesis-like protein7e-1685.5
NC_017904:2641270:2648251264825126492581008Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein1e-1584.7
NC_002976:2434880:243623224362322437113882Staphylococcus epidermidis RP62A, complete genomecobalamin synthesis protein, putative2e-1584
NC_015186:2129046:2129046212904621309081863Acidiphilium multivorum AIU301, complete genomehypothetical protein4e-1583.2
NC_004461:156479:178181178181179062882Staphylococcus epidermidis ATCC 12228, complete genomecobalamin synthesis related protein CobW4e-1582.8
NC_002944:1881405:1891954189195418929761023Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-1480.5
NC_003552:1008475:1012528101252810136311104Methanosarcina acetivorans C2A, complete genomehypothetical protein3e-1479.7
NC_009380:4729340:4730627473062747316941068Salinispora tropica CNB-440 chromosome, complete genomecobalamin synthesis protein, P47K4e-1479.3
NC_018867:2063741:207069820706982071336639Dehalobacter sp. CF chromosome, complete genomePutative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family7e-1479
NC_018866:2033960:204091720409172041555639Dehalobacter sp. DCA chromosome, complete genomePutative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family7e-1479
NC_014614:86213:943659436595300936Clostridium sticklandii, complete genomeputative CobW/P47K family protein4e-1376.3
NC_004578:4708220:4730218473021847312251008Pseudomonas syringae pv. tomato str. DC3000, complete genomecobalamin synthesis protein/P47K family protein4e-1376.3
NC_012778:2049694:2055929205592920570711143Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-1274.7
NC_016002:1765959:178359417835941784517924Pseudogulbenkiania sp. NH8B, complete genomeCobW family protein1e-1274.3
NC_012121:1894148:191000519100051910889885Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein2e-1274.3
NC_016048:1390463:1406150140615014071721023Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-1273.9
NC_018515:3108755:312617031261703127087918Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeGTPase, G3E family2e-1273.6
NC_017387:1110412:112762111276211128619999Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomehypothetical protein2e-1273.6
NC_006625:1:9919911413423Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequencehypothetical protein3e-1273.6
NC_015520:224136:228458228458229393936Mahella australiensis 50-1 BON chromosome, complete genomecobalamin synthesis protein P47K5e-1272.4
NC_011830:1190502:119697811969781197670693Desulfitobacterium hafniense DCB-2, complete genomecobalamin synthesis protein P47K6e-1272.4
NC_014121:3553809:357160635716063572592987Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative cobalamin synthesis protein2e-1170.5
NC_015578:2727684:273571127357112736307597Treponema primitia ZAS-2 chromosome, complete genome2e-1170.5
NC_002944:4163490:4182225418222541834451221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein3e-1066.6
NC_011958:1031592:106717410671741068121948Rhodobacter sphaeroides KD131 chromosome 2, complete genomeCobalamin synthesis protein, P47K1e-0964.7
NC_010322:6037566:603756660375666038537972Pseudomonas putida GB-1 chromosome, complete genomecobalamin synthesis protein P47K2e-0964.3
NC_008577:3485878:3507880350788035089921113Shewanella sp. ANA-3 chromosome 1, complete sequencecobalamin synthesis protein, P47K4e-0962.8
NC_017265:2807302:283061328306132831596984Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-0962.8
NC_005810:1413305:143659614365961437579984Yersinia pestis biovar Microtus str. 91001, complete genomeputative cobalamin synthesis protein4e-0962.8
NC_016584:3040887:304251830425183043150633Desulfosporosinus orientis DSM 765 chromosome, complete genomeGTPase, G3E family7e-0755.5
NC_014206:1202907:1214089121408912152041116Geobacillus sp. C56-T3 chromosome, complete genomecobalamin synthesis protein P47K2e-0654.3