Pre_GI: BLASTP Hits

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Query: NC_014323:992978:1027781 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 1027781, End: 1028596, Length: 816

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014840:76232:754807548076235756Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, AraC family1e-58226
NC_015684:3157941:318130731813073182107801Oligotropha carboxidovorans OM5 chromosome, complete genomeAraC family transcriptional regulator1e-41169
NC_011386:931140:942349942349943251903Oligotropha carboxidovorans OM5, complete genometranscriptional regulator, AraC-family1e-41169
NC_009656:4527457:455663845566384557474837Pseudomonas aeruginosa PA7 chromosome, complete genomeputative HTH-type transcriptional regulator YeaM5e-38157
NC_010512:866932:867480867480868280801Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, AraC family3e-37155
NC_007348:1903937:192325319232531923978726Ralstonia eutropha JMP134 chromosome 2, complete sequenceHelix-turn-helix, AraC type3e-36152
NC_005296:5238882:525889052588905259636747Rhodopseudomonas palustris CGA009, complete genomeCUPIN domain:transcriptional regulator, AraC family2e-36152
NC_013956:1762171:178360717836071784491885Pantoea ananatis LMG 20103 chromosome, complete genomeYeaM5e-36151
NC_011004:5520771:554078055407805541526747Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, AraC family7e-35147
NC_013850:2624899:262993326299332630700768Klebsiella variicola At-22 chromosome, complete genomeAraC protein arabinose-binding/dimerization2e-34145
NC_011283:2627050:263208426320842632851768Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator9e-34144
NC_021150:201237:213263213263214153891Azotobacter vinelandii CA6, complete genomeTranscriptional regulator, AraC-family6e-34144
NC_012560:201237:213263213263214153891Azotobacter vinelandii DJ, complete genomeTranscriptional regulator, AraC-family6e-34144
NC_016845:2729654:274359227435922744359768Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative AraC-type regulatory protein4e-33142
NC_012731:2693091:270144927014492702216768Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeAraC family transcriptional regulator4e-33142
NC_009648:1956070:196782919678291968596768Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein4e-33141
NC_012723:71637:914479144792229783Burkholderia glumae BGR1 plasmid bglu_1p, complete sequenceTranscriptional Regulator, AraC family protein4e-33141
NC_010943:2815865:283222528322252833019795Stenotrophomonas maltophilia K279a, complete genomeputative transcriptional regulator7e-32137
NC_008543:90312:919879198792808822Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family5e-30131
NC_009040:43791:590355903559835801Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completetranscriptional regulator, AraC family1e-29130
NC_008061:2153495:217696521769652177786822Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-29130
NC_018080:1100047:111602911160291116757729Pseudomonas aeruginosa DK2 chromosome, complete genometranscriptional regulator4e-29128
NC_011883:487187:506470506470507279810Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,transcriptional regulator, AraC family1e-28127
NC_002516:4285477:428779442877944288606813Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator9e-29127
NC_008463:1223012:123718312371831237995813Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transcriptional regulator7e-29127
NC_011770:1226923:124137212413721242184813Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator7e-29127
NC_007492:6372900:640591764059176406774858Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family6e-29127
NC_014121:2514544:253240025324002533191792Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeAraC family transcriptional regulator2e-28126
NC_010552:293703:319588319588320406819Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, AraC family7e-28124
NC_009483:936000:937489937489938325837Geobacter uraniireducens Rf4 chromosome, complete genomehelix-turn-helix domain-containing protein8e-28124
NC_008543:259450:277247277247278065819Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, AraC family9e-28124
NC_007511:3080849:308140230814023082220819Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-27123
NC_008752:725189:755815755815756645831Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, AraC family1e-27123
NC_008391:2253188:227088422708842271702819Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, AraC family1e-27123
NC_016628:763833:765986765986766717732Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceAraC family transcriptional regulator4e-27122
NC_015968:2110175:212686921268692127654786Enterobacter asburiae LF7a chromosome, complete genomeAraC family transcriptional regulator7e-27120
NC_014666:5449884:547133154713315472074744Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, AraC family1e-26120
NC_009648:1956070:196297019629701963770801Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein3e-26119
NC_014931:4234288:426418542641854264967783Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, AraC family3e-26119
NC_014540:1835493:184139518413951842174780Burkholderia sp. CCGE1003 chromosome 2, complete sequenceAraC family transcriptional regulator2e-26119
NC_011283:2627050:263595226359522636752801Klebsiella pneumoniae 342 chromosome, complete genomeAraC family transcriptional regulator2e-26119
NC_008228:2295841:230915323091532309944792Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, AraC family6e-26118
NC_012731:2693091:269821426982142699014801Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeAraC family transcriptional regulator1e-25117
NC_009792:2688747:269857326985732699328756Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-25117
NC_014541:1753776:175619617561961756999804Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, AraC family7e-26117
NC_013850:3303500:330401633040163304807792Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, AraC family2e-25116
NC_016027:2580477:259361925936192594443825Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator3e-25115
NC_013850:2624899:263287526328752633648774Klebsiella variicola At-22 chromosome, complete genomeAraC protein arabinose-binding/dimerization3e-25115
NC_014310:2017927:204064720406472041450804Ralstonia solanacearum PSI07 megaplasmid, complete sequencetranscriptional regulator6e-25114
NC_014500:1862000:188072318807231881490768Dickeya dadantii 3937 chromosome, complete genomeAraC family transcriptional regulator2e-24112
NC_018691:4619245:464288746428874643687801Alcanivorax dieselolei B5 chromosome, complete genomeputative transcriptional regulator5e-24111
NC_014973:4503054:450961545096154510385771Geobacter sp. M18 chromosome, complete genomeAraC family transcriptional regulator1e-23110
NC_016582:3763476:376347637634763764261786Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAraC family transcription regulator4e-23108
NC_014118:987889:992476992476993264789Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, AraC family2e-22106
NC_018524:5066720:508661950866195087341723Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein8e-22104
NC_016628:1190366:120559712055971206388792Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceAraC family transcriptional regulator8e-22104
NC_011887:72364:951569515695977822Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completetranscriptional regulator, AraC family3e-21102
NC_015637:325561:338615338615339502888Vibrio anguillarum 775 chromosome chromosome II, complete sequenceAraC family transcriptional regulator9e-21100
NC_010511:1691753:170494717049471705747801Methylobacterium sp. 4-46 chromosome, complete genomeAraC family transcriptional regulator1e-20100
NC_014837:33014:419974199742845849Pantoea sp. At-9b chromosome, complete genomeHelix-turn-helix, AraC domain-containing protein2e-20100
NC_014966:1668822:167527516752751676093819Vibrio vulnificus MO6-24/O chromosome II, complete sequenceAraC family transcripitonal regulator2e-2099.8
NC_010694:63654:738347383474679846Erwinia tasmaniensis, complete genomeProbable transcriptional regulator5e-2098.2
NC_020260:2725201:272979427297942730303510Cronobacter sakazakii Sp291, complete genomeAraC family transcriptional regulator5e-2098.2
NC_007802:3807500:381372638137263814487762Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family6e-2097.8
NC_014158:1479313:148723614872361488009774Tsukamurella paurometabola DSM 20162 chromosome, complete genomeAraC protein arabinose-binding/dimerization1e-1996.7
NC_015663:1869000:188558618855861886341756Enterobacter aerogenes KCTC 2190 chromosome, complete genometranscriptional regulator2e-1996.3
NC_014839:12519:319763197632758783Pantoea sp. At-9b plasmid pPAT9B02, complete sequencetranscriptional regulator, AraC family4e-1995.1
NC_008700:3927896:393709039370903937857768Shewanella amazonensis SB2B, complete genomeAraC-type DNA-binding domain-containing protein8e-1994.4
NC_020209:47504:921739217392502330Pseudomonas poae RE*1-1-14, complete genomeDNA-binding domain-containing protein1e-1894
NC_012490:2660089:266542026654202666226807Rhodococcus erythropolis PR4, complete genomeAraC family transcriptional regulator1e-1687
NC_015663:3742738:375106637510663751380315Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative AraC-type regulatory protein2e-1686.3
NC_015947:3991696:399428339942833995086804Burkholderia sp. JV3 chromosome, complete genomeAraC family transcriptional regulator3e-1685.9
NC_010170:1551923:156014815601481560621474Bordetella petrii, complete genomeputative transcriptional regulator3e-1685.5
NC_009654:304000:309532309532310299768Marinomonas sp. MWYL1, complete genomeAraC family transcriptional regulator1e-1584
NC_011071:4000620:400570140057014006504804Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, AraC family9e-1684
NC_016628:763833:767654767654768496843Vibrio furnissii NCTC 11218 chromosome 2, complete sequencesubstrate-binding transcriptional regulator, AraC family protein2e-1582.8
NC_013421:1696746:170689217068921707548657Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, AraC family2e-1582.8
NC_009921:6483660:649183664918366492549714Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family3e-1582.4
NC_020209:47504:523785237852890513Pseudomonas poae RE*1-1-14, complete genomeAraC family transcriptional regulator3e-1582.4
NC_014718:791528:795900795900796277378Burkholderia rhizoxinica HKI 454 chromosome, complete genomeTranscriptional regulator, AraC family4e-1582
NC_007802:1240989:125477712547771255535759Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family8e-1580.9
NC_014210:2747787:276307727630772763898822Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, AraC family4e-1479
NC_016609:1774259:180376518037651804550786Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator9e-1374.3
NC_020126:3426439:343244534324453433212768Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator3e-1272.4
NC_015859:3177199:3208944320894432104971554Corynebacterium variabile DSM 44702 chromosome, complete genomeAraC DNA-binding transcription regulator1e-1170.5
NC_009832:622969:642567642567643334768Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family2e-1170.1
NC_020126:7015976:702041370204137021243831Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator1e-1067.4
NC_009921:3551036:3574481357448135760221542Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family9e-1167.4
NC_015277:2096266:210040521004052101220816Sphingobacterium sp. 21 chromosome, complete genometranscriptional regulator, AraC family2e-0963.2
NC_016845:2729654:273873327387332739047315Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative AraC-type regulatory protein3e-0962.8
NC_016612:5231065:525519452551945255376183Klebsiella oxytoca KCTC 1686 chromosome, complete genomeAraC family transcriptional regulator4e-0962
NC_014121:3188928:320787632078763208088213Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-0859.7
NC_016628:763833:780408780408780857450Vibrio furnissii NCTC 11218 chromosome 2, complete sequencesubstrate-binding transcriptional regulator, AraC family protein2e-0756.6
NC_015737:449914:4499144499144523582445Clostridium sp. SY8519, complete genomebeta-xylosidase6e-0754.7
NC_015410:2505168:251160125116012512404804Pseudomonas mendocina NK-01 chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_003295:2787371:280237428023742803273900Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-0653.1
NC_007963:814148:840043840043840843801Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, AraC family2e-0653.1
NC_012214:2019000:203667520366752037016342Erwinia pyrifoliae Ep1/96, complete genomeTranscriptional regulator, AraC family4e-0652.4
NC_010322:3315024:333232733323273333292966Pseudomonas putida GB-1 chromosome, complete genomeAraC family transcriptional regulator8e-0651.2