Pre_GI: BLASTP Hits

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Query: NC_014323:992978:1023696 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 1023696, End: 1024748, Length: 1053

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014931:3642779:364471236447123645674963Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, AraC family5e-35148
NC_007802:3807500:3819336381933638203491014Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family9e-24111
NC_011000:2831183:284490528449052845858954Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein7e-23108
NC_011881:89705:1018661018661028671002Arthrobacter chlorophenolicus A6 plasmid pACHL02, completetranscriptional regulator, AraC family2e-21103
NC_014323:992978:101159110115911012514924Herbaspirillum seropedicae SmR1 chromosome, complete genomenitrilase regulator protein4e-21102
NC_007802:4071006:407474240747424075740999Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family8e-2098.2
NC_020302:85821:134949134949135863915Corynebacterium halotolerans YIM 70093 = DSM 44683, completetranscriptional regulator, AraC family protein9e-2097.8
NC_013595:8603188:8612964861296486139921029Streptosporangium roseum DSM 43021, complete genomeAraC family transcriptional regulator2e-1893.2
NC_015138:201323:201323201323202261939Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeAraC family transcriptional regulator6e-1892
NC_016514:2079975:210364421036442104552909Enterobacter cloacae EcWSU1 chromosome, complete genometranscriptional activator feaR1e-1790.9
NC_013446:3209000:3211048321104832120641017Comamonas testosteroni CNB-2, complete genometranscriptional regulator, AraC family2e-1790.5
NC_010505:1581429:158326015832601584234975Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, AraC family4e-1685.9
NC_012721:109500:1187871187871198211035Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, AraC family protein2e-1583.6
NC_007511:3512100:3512100351210035131341035Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family3e-1582.8
NC_015410:3093465:315460531546053155408804Pseudomonas mendocina NK-01 chromosome, complete genomeDNA-binding transcriptional activator FeaR9e-1581.3
NC_003888:5443832:5452526545252654536231098Streptomyces coelicolor A3(2), complete genomearaC family regulatory protein4e-1479.3
NC_012791:2233098:225195022519502252867918Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, AraC family4e-1479.3
NC_015259:734795:765291765291766247957Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAraC-family transcriptional regulator7e-1478.6
NC_009921:8147947:815632781563278157223897Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family8e-1478.2
NC_015136:1101725:112277511227751123755981Burkholderia sp. CCGE1001 chromosome 1, complete sequenceAraC family transcriptional regulator9e-1374.7
NC_010623:1961685:1973975197397519750391065Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-1274.3
NC_010501:3671517:3690878369087836920471170Pseudomonas putida W619, complete genometranscriptional regulator, AraC family2e-1273.2
NC_008268:7485710:749915374991537500100948Rhodococcus sp. RHA1, complete genometranscriptional regulator3e-1273.2
NC_019940:3089884:310140831014083102406999Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator3e-1272.8
NC_012982:2730000:274518827451882746102915Hirschia baltica ATCC 49814, complete genometranscriptional regulator, AraC family4e-1272.8
NC_003155:883500:891284891284892279996Streptomyces avermitilis MA-4680, complete genomeAraC-family transcriptional regulator6e-1272
NC_015312:848403:857726857726858697972Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeAraC family transcriptional regulator2e-1170.5
NC_011757:217739:231053231053232048996Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family2e-1170.5
NC_011757:217739:233537233537234532996Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family3e-1169.3
NC_012808:157156:161470161470162336867Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, AraC family5e-1168.9
NC_012808:157156:158985158985159980996Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, AraC family5e-1168.9
NC_015953:4746983:4763337476333747643651029Streptomyces sp. SirexAA-E chromosome, complete genomeHelix-turn-helix, AraC domain-containing protein1e-1067.4
NC_011757:517000:530059530059530844786Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family2e-1067
NC_012721:2556160:2556160255616025571941035Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, AraC family protein7e-1065.1
NC_013595:5282207:5286943528694352880041062Streptosporangium roseum DSM 43021, complete genomeAraC-type DNA-binding domain-containing protein- like protein1e-0964.7
NC_015723:430165:4573224573224596852364Cupriavidus necator N-1 chromosome 2, complete sequenceformamidase FmdR1e-0964.7
NC_012982:2730000:2747571274757127498862316Hirschia baltica ATCC 49814, complete genometranscriptional regulator, AraC family with acetamidase/formamidase activity6e-0962
NC_003888:8594500:860753986075398608480942Streptomyces coelicolor A3(2), complete genometranscriptional regulator1e-0861.2
NC_013929:3600343:361090536109053611753849Streptomyces scabiei 87.22 chromosome, complete genomecellobiose-dependent regulator TxtR1e-0860.8
NC_016114:7282882:7291086729108672921051020Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeAraC family transcriptional regulator1e-0860.8
NC_015723:1486000:1489297148929714903551059Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator2e-0860.5
NC_008835:2133696:213845321384532139445993Burkholderia mallei NCTC 10229 chromosome I, complete sequencetranscriptional regulator, araC family4e-0859.3
NC_009079:705931:710682710682711674993Burkholderia mallei NCTC 10247 chromosome I, complete sequencetranscriptional regulator, araC family4e-0859.3
NC_011898:1218500:1234736123473612363641629Clostridium cellulolyticum H10, complete genometwo component transcriptional regulator, AraC family6e-0858.9
NC_006349:1630514:1646532164653216475931062Burkholderia mallei ATCC 23344 chromosome 2, complete sequencetranscriptional regulator, araC family6e-0858.9
NC_014118:1592000:1593657159365715946851029Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, AraC family2e-0757
NC_016609:6177651:617765161776516178427777Niastella koreensis GR20-10 chromosome, complete genometwo component transcriptional regulator, AraC family2e-0757
NC_014817:29795:422124221243198987Asticcacaulis excentricus CB 48 chromosome 2, complete sequencetranscriptional regulator, arac family6e-0755.5
NC_017249:3267500:3286552328655232875651014Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-0755.5
NC_014366:1663034:1664567166456716656041038Gamma proteobacterium HdN1, complete genometranscriptional regulator, AraC family7e-0755.1
NC_014153:2077647:209508320950832096024942Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, AraC family9e-0754.7
NC_017955:3545626:356240935624093563371963Modestobacter marinus, complete genomeAraC family transcriptional regulator1e-0654.3
NC_015761:2373967:239818723981872399041855Salmonella bongori NCTC 12419, complete genomeAraC family regulatory protein5e-0652.4
NC_015259:485015:5491645491645502431080Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, AraC family8e-0651.6