Pre_GI: BLASTN Hits

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Query: NC_014323:992978 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 992978, End: 1034361, Length: 41384

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015856:11520211152021117726325243Collimonas fungivorans Ter331 chromosome, complete genome3e-112414BLASTN svgBLASTP svg
NC_015424:2726223*2726223277096744745Aeromonas veronii B565 chromosome, complete genome3e-26129BLASTN svgBLASTP svg
NC_020209:32620003262000328797525976Pseudomonas poae RE*1-1-14, complete genome4e-19105BLASTN svgBLASTP svg
NC_003902:35140003514000353798123982Xanthomonas campestris pv. campestris str. ATCC 33913, complete1e-18103BLASTN svgBLASTP svg
NC_003295:21117302111730213127819549Ralstonia solanacearum GMI1000, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_010943:325739*32573934942023682Stenotrophomonas maltophilia K279a, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_014306:12447211244721126333018610Erwinia billingiae Eb661, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012724:14745414745417238824935Burkholderia glumae BGR1 chromosome 1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_006087:1483761*1483761150739223632Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014562:16982531698253172164923397Pantoea vagans C9-1 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014562:2871765*2871765290090029136Pantoea vagans C9-1 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010515:12052581205258122726722010Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence5e-1281.8BLASTN svgBLASTP svg
NC_003198:44534574453457450773054274Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-1075.8BLASTN svgBLASTP svg
NC_005296:5238882*5238882526489126010Rhodopseudomonas palustris CGA009, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_006511:26779642677964270110823145Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-1075.8BLASTN svgBLASTP svg
NC_007613:76123476123478018918956Shigella boydii Sb227, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012997:36519933651993367433122339Teredinibacter turnerae T7901, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_020260:31280531280533684424040Cronobacter sakazakii Sp291, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_012590:19389519389521817724283Corynebacterium aurimucosum ATCC 700975, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_006138:23793322379332240570926378Desulfotalea psychrophila LSv54, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008148:17116791711679173196220284Rubrobacter xylanophilus DSM 9941, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010170:4196197*4196197422572429528Bordetella petrii, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_013956:35257113525711354815922449Pantoea ananatis LMG 20103 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_014837:37664263766426379523728812Pantoea sp. At-9b chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_018691:28109492810949283752026572Alcanivorax dieselolei B5 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015312:63574696357469638125623788Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010170:20951420951423649426981Bordetella petrii, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010694:61498561498564279627812Erwinia tasmaniensis, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_011027:136954*13695415855321600Chlorobaculum parvum NCIB 8327, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_014323:961825*96182598122819404Herbaspirillum seropedicae SmR1 chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_009668:1591290*1591290161420122912Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_010623:19616851961685204159979915Burkholderia phymatum STM815 chromosome 2, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_011149:28021992802199282596423766Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0765.9BLASTN svgBLASTP svg
NC_012724:18920001892000191853026531Burkholderia glumae BGR1 chromosome 1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013282:33896193389619341209922481Cronobacter turicensis, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015061:59624759624762407627830Rahnella sp. Y9602 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_020211:45982174598217463062032404Serratia marcescens WW4, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007963:15820891582089161676234674Chromohalobacter salexigens DSM 3043, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015376:11850001185000120456219563Burkholderia gladioli BSR3 chromosome chromosome 2, complete1e-0663.9BLASTN svgBLASTP svg
NC_020209:19038301903830192917925350Pseudomonas poae RE*1-1-14, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_004311:1096649*1096649112015223504Brucella suis 1330 chromosome II, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_006933:1051873*1051873107526423392Brucella abortus biovar 1 str. 9-941 chromosome II, complete5e-0661.9BLASTN svgBLASTP svg
NC_007624:1046500*1046500107179425295Brucella melitensis biovar Abortus 2308 chromosome II, complete5e-0661.9BLASTN svgBLASTP svg
NC_010167:1287000*1287000131378426785Brucella suis ATCC 23445 chromosome II, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_010617:14289021428902145226023359Kocuria rhizophila DC2201, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010740:1051000*1051000107626825269Brucella abortus S19 chromosome 2, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_011144:26742422674242270317628935Phenylobacterium zucineum HLK1, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_013118:1109610*1109610113309923490Brucella microti CCM 4915 chromosome 2, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_013446:27610002761000280309942100Comamonas testosteroni CNB-2, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_013889:25613812561381258452423144Thioalkalivibrio sp. K90mix chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_015858:1150446*1150446117370523260Brucella pinnipedialis B2/94 chromosome chromosome 2, complete5e-0661.9BLASTN svgBLASTP svg
NC_003318:183914*18391420826324350Brucella melitensis 16M chromosome II, complete sequence5e-0661.9BLASTN svgBLASTP svg