Pre_GI: BLASTP Hits

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Query: NC_014323:992978:994790 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 994790, End: 995632, Length: 843

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015856:1152021:116838711683871169373987Collimonas fungivorans Ter331 chromosome, complete genomeputative bacteriophage protein6e-73274
NC_003902:3514000:353195935319593532801843Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related capsid scaffold protein6e-61234
NC_010943:325739:326789326789327652864Stenotrophomonas maltophilia K279a, complete genomepresumed capsid scaffolding protein (gpo)7e-60230
NC_020209:3262000:327625932762593277137879Pseudomonas poae RE*1-1-14, complete genomeputative capsid scafolding protein1e-56219
NC_012660:1737423:174070417407041741582879Pseudomonas fluorescens SBW25 chromosome, complete genomeputative capsid scafolding protein1e-55216
NC_003295:2111730:211173021117302112569840Ralstonia solanacearum GMI1000, complete genomePROBABLE BACTERIOPHAGE PROTEIN2e-54212
NC_007963:1582089:158574715857471586562816Chromohalobacter salexigens DSM 3043, complete genomephage capsid scaffolding2e-52206
NC_012917:3565268:358854235885423589396855Pectobacterium carotovorum subsp. carotovorum PC1, complete genomecapsid scaffolding1e-52206
NC_012724:1892000:190577019057701906642873Burkholderia glumae BGR1 chromosome 1, complete genomePhage capsid scaffolding protein1e-51202
NC_013008:2824511:282451128245112825365855Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage capsid scaffolding protein GpO4e-51201
NC_011353:2825500:282553128255312826385855Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage capsid scaffolding protein GpO4e-51201
NC_014306:103545:121387121387122223837Erwinia billingiae Eb661, complete genomePutative phage capsid scaffolding protein3e-50198
NC_017047:4037674:405581740558174056668852Rahnella aquatilis HX2 chromosome, complete genomecapsid scaffolding protein5e-50197
NC_020260:312805:331321331321332148828Cronobacter sakazakii Sp291, complete genomecapsid scaffold-like protein2e-49196
NC_015061:596247:623225623225624076852Rahnella sp. Y9602 chromosome, complete genomecapsid scaffolding2e-49195
NC_016845:4046142:406473640647364065590855Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative prophage capsid scaffolding protein1e-48193
NC_009648:3803622:382293638229363823790855Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage capsid scaffolding protein1e-48193
NC_020181:5182568:518371251837125184566855Enterobacter aerogenes EA1509E, complete genomePhage capsid scaffolding protein1e-48193
NC_006511:2677964:268046026804602681293834Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative capsid protein1e-48193
NC_003198:4453457:449222544922254493058834Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative capsid protein1e-48193
NC_016810:2871689:287344528734452874278834Salmonella enterica subsp. enterica serovar Typhimurium strputative capsid protein3e-48191
NC_016857:2871689:287344528734452874278834Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative capsid protein3e-48191
NC_017046:2869873:287218728721872873020834Salmonella enterica subsp. enterica serovar Typhimurium str. 798capsid protein3e-48191
NC_011149:2802199:280540128054012806234834Salmonella enterica subsp. enterica serovar Agona str. SL483,phage capsid scaffolding protein2e-47189
NC_011205:2938356:294064529406452941478834Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage capsid scaffolding protein2e-47189
NC_014837:3766426:377019137701913771024834Pantoea sp. At-9b chromosome, complete genomecapsid scaffolding1e-46187
NC_017047:1551836:156944015694401570285846Rahnella aquatilis HX2 chromosome, complete genomecapsid scaffolding protein2e-46186
NC_008800:1870596:187241418724141873268855Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative phage capsid scaffolding protein2e-46186
NC_007613:761234:775348775348776181834Shigella boydii Sb227, complete genomeputative capsid scaffolding protein3e-46185
NC_012724:147454:150329150329151141813Burkholderia glumae BGR1 chromosome 1, complete genomePhage capsid scaffolding protein (GPO)4e-46185
NC_016818:1605918:162268916226891623534846Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePhage capsid scaffolding protein (GPO) serine peptidase5e-46184
NC_015061:1598920:161885616188561619707852Rahnella sp. Y9602 chromosome, complete genomecapsid scaffolding1e-45183
NC_010694:614985:639310639310640173864Erwinia tasmaniensis, complete genomePutative capsid scaffolding protein1e-45183
NC_016845:1773416:178768417876841788517834Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Presumed capsid scaffolding protein (GpO)1e-45183
NC_012947:2898179:289874428987442899496753Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecapsid scaffolding3e-45182
NC_013956:3525711:352816235281623529124963Pantoea ananatis LMG 20103 chromosome, complete genomeO8e-45180
NC_014306:1244721:125997012599701260824855Erwinia billingiae Eb661, complete genomecapsid scaffolding protein9e-45180
NC_017059:3688688:369059536905953691395801Rhodospirillum photometricum DSM 122, complete genomePhage-related capsid scaffolding protein (GPO-like)9e-41167
NC_012962:4942000:495355249535524954388837Photorhabdus asymbiotica, complete genomeputative capsid scaffolding protein1e-39163
NC_013282:3389619:339300833930083393754747Cronobacter turicensis, complete genomePresumed capsid-scaffolding protein7e-38157
NC_020211:4598217:460162646016264602441816Serratia marcescens WW4, complete genomephage capsid scaffolding protein GpO1e-36153
NC_008750:3314309:332613733261373327057921Shewanella sp. W3-18-1, complete genomephage capsid scaffolding1e-27123
NC_008751:3214000:321582532158253216673849Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage capsid scaffolding2e-25116
NC_008751:1762562:176433317643331765193861Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage capsid scaffolding2e-25116
NC_009348:4135002:413857741385774139449873Aeromonas salmonicida subsp. salmonicida A449, complete genomephage capsid scaffolding protein1e-22107
NC_015224:3291736:330998633099863310507522Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Phage capsid scaffolding4e-22105
NC_011883:269497:288701288701289531831Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,capsid scaffolding1e-21103
NC_013892:992811:998643998643999482840Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-1892.8
NC_014500:894136:929517929517930359843Dickeya dadantii 3937 chromosome, complete genomeputative capsid scaffolding protein4e-1788.6
NC_013592:804288:830223830223831059837Dickeya dadantii Ech586, complete genomecapsid scaffolding1e-1687
NC_012125:894955:929828929828930631804Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1582.8
NC_009656:5185704:5201873520187352030181146Pseudomonas aeruginosa PA7 chromosome, complete genomescaffold1e-1480.9
NC_015061:2770856:277085627708562771695840Rahnella sp. Y9602 chromosome, complete genomecapsid scaffolding6e-1478.2