Pre_GI: BLASTP Hits

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Query: NC_014323:992978:1005383 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 1005383, End: 1006417, Length: 1035

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010623:1961685:2021028202102820220441017Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family3e-114411
NC_010557:316000:3182723182723192881017Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, AraC family5e-70265
NC_010623:1961685:1995143199514319961891047Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family9e-70263
NC_012660:3179980:3185843318584331868591017Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein2e-55216
NC_016830:3869572:3944718394471839457341017Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator9e-48191
NC_011770:4542183:4564793456479345657941002Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator4e-45182
NC_008463:4342119:4364836436483643658371002Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable transcriptional regulator1e-44180
NC_010501:3671517:3693177369317736942051029Pseudomonas putida W619, complete genometranscriptional regulator, AraC family4e-34145
NC_003911:4001094:4017291401729140183221032Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, AraC family2e-32139
NC_008702:3375027:3391123339112333922561134Azoarcus sp. BH72, complete genomeputative ornithine utilization regulator6e-32138
NC_013446:2623528:2624404262440426254981095Comamonas testosteroni CNB-2, complete genometranscriptional regulator, AraC family1e-31137
NC_007974:2097334:2111901211190121129471047Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, AraC family5e-29128
NC_009952:2752500:2765180276518027662081029Dinoroseobacter shibae DFL 12, complete genomeputative transcriptional regulator5e-29128
NC_011770:4924127:4961086496108649621051020Pseudomonas aeruginosa LESB58, complete genometranscriptional regulator OruR3e-23109
NC_008463:4743296:4744858474485847458771020Pseudomonas aeruginosa UCBPP-PA14, complete genometranscriptional regulator OruR3e-23109
NC_002516:891000:9057269057269067451020Pseudomonas aeruginosa PAO1, complete genometranscriptional regulator OruR3e-23109
NC_008740:2905990:2905990290599029070031014Marinobacter aquaeolei VT8, complete genomehelix-turn-helix- domain containing protein, AraC type9e-21101
NC_018691:4619245:4644618464461846456521035Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, AraC family protein1e-1997.4
NC_013222:1659619:168204516820451683022978Robiginitalea biformata HTCC2501, complete genometranscriptional regulator, AraC family protein6e-1995.1
NC_020829:1840281:1842091184209118431221032Pseudomonas denitrificans ATCC 13867, complete genomeputative regulator1e-1894
NC_002516:2306776:2306776230677623078101035Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator2e-1893.2
NC_008061:2193000:2207475220747522085691095Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family6e-1892
NC_009656:5505413:5527239552723955283091071Pseudomonas aeruginosa PA7 chromosome, complete genomeAraC family transcriptional regulator2e-1790.5
NC_010511:6067000:6076192607619260772861095Methylobacterium sp. 4-46 chromosome, complete genomeAraC family transcriptional regulator2e-1790.1
NC_006351:73000:8293882938839571020Burkholderia pseudomallei K96243 chromosome 2, complete sequenceregulatory protein3e-1789.7
NC_009075:92210:1022481022481032521005Burkholderia pseudomallei 668 chromosome II, complete sequenceputative transcriptional regulator3e-1789.7
NC_007511:3371319:3372433337243333734791047Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family4e-1789
NC_002678:5060670:5060670506067050617341065Mesorhizobium loti MAFF303099, complete genomehypothetical protein6e-1788.6
NC_015663:3742738:3760268376026837612751008Enterobacter aerogenes KCTC 2190 chromosome, complete genomeAraC family transcriptional regulator1e-1687.8
NC_011001:163813:1853691853691864151047Burkholderia cenocepacia J2315 chromosome 2, complete sequenceAraC family regulatory protein2e-1687
NC_014323:1:1504715047161081062Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein8e-1684.7
NC_020181:1653261:1656963165696316579701008Enterobacter aerogenes EA1509E, complete genomevirulence regulating protein1e-1584.3
NC_009439:101174:121557121557122549993Pseudomonas mendocina ymp, complete genomeAraC family transcriptional regulator1e-1584.3
NC_021150:2348214:2371687237168723727331047Azotobacter vinelandii CA6, complete genomeTranscription activator in PHB biosynthesis, AraC family2e-1583.6
NC_012560:2348202:2371675237167523727211047Azotobacter vinelandii DJ, complete genomeTranscription activator in PHB biosynthesis, AraC family2e-1583.6
NC_015136:1101725:1127466112746611284941029Burkholderia sp. CCGE1001 chromosome 1, complete sequenceAraC family transcriptional regulator3e-1582.8
NC_007492:3180480:318583231858323186830999Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family4e-1582.8
NC_013592:1602242:1616182161618216171921011Dickeya dadantii Ech586, complete genometranscriptional regulator, AraC family1e-1481.3
NC_010506:3585533:3602734360273436038131080Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, AraC family1e-1480.9
NC_007651:3656433:3668226366822636692451020Burkholderia thailandensis E264 chromosome I, complete sequencetranscriptional regulator, putative2e-1480.5
NC_004129:4596040:4617563461756346185851023Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family2e-1480.1
NC_014259:2948335:2949247294924729503171071Acinetobacter sp. DR1 chromosome, complete genomeAraC family transcriptional regulator4e-1479.3
NC_010172:31264:3612336123372231101Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type3e-1479.3
NC_011757:4293000:4333052433305243341491098Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family5e-1479
NC_012880:1585255:1593922159392215949351014Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family6e-1478.6
NC_011894:2359128:2371528237152823726161089Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family6e-1478.6
NC_011757:1288637:1298341129834112994411101Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family7e-1478.6
NC_020064:521500:5491445491445502021059Serratia marcescens FGI94, complete genomeDNA-binding domain-containing protein, AraC-type1e-1377.4
NC_014310:1822751:1837637183763718386561020Ralstonia solanacearum PSI07 megaplasmid, complete sequenceAraC family transcriptional regulator1e-1377.4
NC_003296:673790:7245307245307255491020Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-1377
NC_011894:2503639:251167325116732511990318Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family2e-1376.6
NC_015376:3320818:3331605333160533326571053Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator, AraC family protein2e-1376.6
NC_015677:3787419:379209937920993793067969Ramlibacter tataouinensis TTB310 chromosome, complete genomeAraC family transcriptional regulator4e-1375.9
NC_013192:1504310:1504310150431015053831074Leptotrichia buccalis DSM 1135, complete genometranscriptional regulator, AraC family5e-1375.5
NC_010162:8873051:888440788844078885000594Sorangium cellulosum 'So ce 56', complete genomeAraC family transcriptional regulator6e-1375.1
NC_008027:2648560:2664870266487026658741005Pseudomonas entomophila L48, complete genomeDNA-binding protein, AraC family8e-1375.1
NC_010501:4989455:4998963499896350000001038Pseudomonas putida W619, complete genometranscriptional regulator, AraC family1e-1274.3
NC_012660:5793200:5815075581507558162291155Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein2e-1273.9
NC_020209:47504:7962979629806361008Pseudomonas poae RE*1-1-14, complete genomeAraC family transcriptional regulator2e-1273.9
NC_011894:2125474:213090421309042131221318Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family2e-1273.9
NC_011894:7702000:773128277312827731632351Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family2e-1273.6
NC_013037:6344532:6368914636891463699511038Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family2e-1273.2
NC_007650:84140:9053790537915531017Burkholderia thailandensis E264 chromosome II, complete sequencehypothetical protein2e-1273.2
NC_020829:4429435:4441701444170144427711071Pseudomonas denitrificans ATCC 13867, complete genomeAraC family transcriptional regulator4e-1272.8
NC_003911:1078949:110804211080421109040999Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, AraC family5e-1272.4
NC_013222:1659619:168700316870031687992990Robiginitalea biformata HTCC2501, complete genometranscriptional regulator, AraC family protein8e-1271.6
NC_016609:3835656:384093838409383841936999Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator1e-1171.2
NC_014364:3633291:364876036487603649443684Spirochaeta smaragdinae DSM 11293 chromosome, complete genome1e-1171.2
NC_015690:1967244:2015425201542520164621038Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-1170.5
NC_018697:505915:5090685090685100901023Cycloclasticus sp. P1 chromosome, complete genomeAraC-family transcriptional regulator2e-1170.5
NC_010506:5155951:5172420517242051735231104Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, AraC family2e-1170.1
NC_010172:31264:5004950049511311083Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type3e-1169.7
NC_018691:761560:7629207629207639421023Alcanivorax dieselolei B5 chromosome, complete genomePutative AraC family transcription regulator3e-1169.7
NC_014762:2428721:2451614245161424526541041Sulfuricurvum kujiense DSM 16994 chromosome, complete genometranscriptional regulator, arac family5e-1168.9
NC_008705:3430839:3436435343643534374391005Mycobacterium sp. KMS, complete genomehelix-turn-helix- domain containing protein, AraC type6e-1168.6
NC_009077:3376351:3381947338194733829511005Mycobacterium sp. JLS, complete genomehelix-turn-helix- domain containing protein, AraC type6e-1168.6
NC_008146:3401743:3408153340815334091571005Mycobacterium sp. MCS, complete genometranscriptional regulator, AraC family6e-1168.6
NC_016947:2380500:2392470239247023934741005Mycobacterium intracellulare MOTT-02 chromosome, complete genomeAraC family transcriptional regulator6e-1168.6
NC_018691:2254566:2259228225922822602921065Alcanivorax dieselolei B5 chromosome, complete genomePutative transcriptional regulator6e-1168.6
NC_010172:573046:5788135788135798771065Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type8e-1168.2
NC_013510:4484000:4500552450055245016071056Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, AraC family1e-1067.8
NC_010511:2079744:210000321000032100419417Methylobacterium sp. 4-46 chromosome, complete genome2e-1066.6
NC_011894:2747491:2753607275360727547491143Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family5e-1065.9
NC_008390:2448379:2449503244950324505401038Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, AraC family6e-1065.5
NC_011894:585637:613011613011613421411Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family9e-1064.7
NC_009338:4869700:4887442488744248884821041Mycobacterium gilvum PYR-GCK chromosome, complete genomehelix-turn-helix domain-containing protein1e-0964.7
NC_004578:5916711:594281359428135943805993Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, AraC family1e-0964.3
NC_004129:4596040:459824945982494599214966Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, putative1e-0964.3
NC_020829:4429435:4442768444276844438141047Pseudomonas denitrificans ATCC 13867, complete genomeAraC family transcriptional regulator2e-0963.5
NC_010511:4415731:442598544259854426191207Methylobacterium sp. 4-46 chromosome, complete genome2e-0963.5
NC_011979:589874:594253594253595227975Geobacter sp. FRC-32, complete genometranscriptional regulator, AraC family2e-0963.2
NC_009832:1280938:1293321129332112943581038Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family5e-0962.4
NC_010511:7553703:757677675767767577060285Methylobacterium sp. 4-46 chromosome, complete genome9e-0961.6
NC_017075:2689014:2690594269059426916161023Rubrivivax gelatinosus IL144, complete genomeAraC family transcriptional regulator1e-0861.2
NC_016887:1714664:172429617242961725198903Nocardia cyriacigeorgica GUH-2, complete genometranscriptional regulator1e-0860.8
NC_009078:74954:823408234082975636Burkholderia pseudomallei 1106a chromosome II, complete sequenceregulatory protein2e-0860.5
NC_008253:3941938:397961739796173980447831Escherichia coli 536, complete genomeputative CS12 fimbrial-like upstream regulatory protein3e-0859.7
NC_017075:3165858:3193580319358031946051026Rubrivivax gelatinosus IL144, complete genomeAraC family transcriptional regulator4e-0859.3
NC_009075:92210:946159461595127513Burkholderia pseudomallei 668 chromosome II, complete sequencetranscriptional regulator, AraC family4e-0859.3
NC_002516:2436304:244856824485682449545978Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator4e-0859.3
NC_013406:1640787:1643715164371516449321218Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator7e-0858.5
NC_016514:1627664:162959516295951630386792Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YbcM1e-0757.4
NC_007492:3180480:3186837318683731878891053Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family2e-0757
NC_011884:2422000:2433017243301724340331017Cyanothece sp. PCC 7425, complete genometranscriptional regulator, AraC family3e-0756.6
NC_014206:1694330:1703164170316417043721209Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator2e-0756.6
NC_007645:6407370:642240164224016423237837Hahella chejuensis KCTC 2396, complete genomeAraC-type DNA-binding domain-containing protein3e-0756.2
NC_007435:1914375:191647419164741917091618Burkholderia pseudomallei 1710b chromosome II, complete sequenceAraC family regulatory protein3e-0756.2
NC_015563:4206112:422286042228604223852993Delftia sp. Cs1-4 chromosome, complete genomeAraC family transcriptional regulator3e-0756.2
NC_006351:73000:752967529675802507Burkholderia pseudomallei K96243 chromosome 2, complete sequenceAraC family regulatory protein4e-0756.2
NC_015566:3417951:345056934505693451453885Serratia sp. AS12 chromosome, complete genomeAraC family transcriptional regulator7e-0755.1
NC_013592:1056500:105977510597751060623849Dickeya dadantii Ech586, complete genometranscriptional regulator, AraC family1e-0654.3
NC_009078:74954:773597735977871513Burkholderia pseudomallei 1106a chromosome II, complete sequenceAraC family regulatory protein1e-0654.3
NC_010995:1648897:1664476166447616654831008Cellvibrio japonicus Ueda107, complete genometranscriptional regulator, AraC family1e-0653.9
NC_015723:1047418:1058612105861210596371026Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator4e-0652.8
NC_016831:1950650:196440919644091965197789Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator5e-0652.4
NC_010102:2020762:203451220345122035300789Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-0652.4
NC_006511:1808815:182479918247991825578780Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbacterial regulatory protein, AraC family5e-0652.4
NC_011147:1802535:181998218199821820761780Salmonella enterica subsp. enterica serovar Paratyphi A straraC family transcriptional regulator5e-0652.4
NC_011205:1147556:115121611512161152004789Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853AraC family transcriptional regulator5e-0652.4
NC_011294:1048223:105059810505981051377780Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator5e-0652.4
NC_016626:1825845:185472818547281855714987Burkholderia sp. YI23 plasmid byi_1p, complete sequenceAraC family transcriptional regulator5e-0652.4
NC_011274:1057887:105988710598871060666780Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator5e-0652.4
NC_003197:1170746:117274611727461173525780Salmonella typhimurium LT2, complete genomebacterial regulatory protein5e-0652.4
NC_016810:1126693:112906811290681129847780Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator5e-0652.4
NC_012125:2687980:270174127017412702529789Salmonella enterica subsp. enterica serovar Paratyphi C strainAraC family transcriptional regulator5e-0652.4
NC_011094:1127983:113164311316431132431789Salmonella enterica subsp. enterica serovar Schwarzengrund strregulatory protein5e-0652.4
NC_014623:9492000:951145895114589512228771Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeAraC family transcriptional regulator5e-0652.4
NC_011083:1173802:117746211774621178250789Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacterial regulatory protein5e-0652.4
NC_011149:1035990:104229310422931043081789Salmonella enterica subsp. enterica serovar Agona str. SL483,bacterial regulatory protein5e-0652.4
NC_016863:1128381:113038111303811131160780Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1regulatory protein5e-0652.4
NC_016860:1168431:117043111704311171210780Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator5e-0652.4
NC_016856:1128715:113109011310901131869780Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sregulatory protein5e-0652.4
NC_016857:1126693:112900511290051129847843Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74regulatory protein7e-0652
NC_017046:1127325:112926211292621130104843Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator7e-0652
NC_003198:1078113:1081781108178110832711491Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator (pseudogene)7e-0652
NC_016832:1880174:189439218943921894934543Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Bacterial regulatory protein, AraC6e-0652
NC_015138:201323:201323201323202261939Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeAraC family transcriptional regulator7e-0651.6
NC_020126:3426439:343244534324453433212768Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator8e-0651.6