Pre_GI: BLASTP Hits

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Query: NC_016830:4914406:4933024 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4933024, End: 4934028, Length: 1005

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:5002595:5021088502108850220921005Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative oxidoreductase2e-175614
NC_017986:1128879:1133051113305111340521002Pseudomonas putida ND6 chromosome, complete genomeAlcohol dehydrogenase, zinc-containing1e-146519
NC_009512:4375452:4376391437639143773921002Pseudomonas putida F1, complete genomeAlcohol dehydrogenase, zinc-binding domain protein1e-146519
NC_009656:3733913:3753978375397837549821005Pseudomonas aeruginosa PA7 chromosome, complete genomeoxidoreductase2e-143508
NC_014472:3530274:3539306353930635403131008Flavobacteriales bacterium HTCC2170 chromosome, complete genomeputative NADP-dependent oxidoreductase5e-112404
NC_015566:3269469:3273833327383332748671035Serratia sp. AS12 chromosome, complete genome2-alkenal reductase8e-74277
NC_009848:775000:7750667750667760701005Bacillus pumilus SAFR-032, complete genomeNADP-dependent dehydrogenase4e-72271
NC_013421:553193:5593395593395603761038Pectobacterium wasabiae WPP163, complete genomeAlcohol dehydrogenase zinc-binding domain protein4e-70265
NC_002947:2809591:2822425282242528234591035Pseudomonas putida KT2440, complete genomealcohol dehydrogenase, zinc-containing4e-70265
NC_017328:1835108:1857742185774218588721131Shigella flexneri 2002017 chromosome, complete genomeputative oxidoreductase1e-69263
NC_008258:1784637:1804487180448718055901104Shigella flexneri 5 str. 8401, complete genomeputative oxidoreductase1e-69263
NC_004337:1783645:1805163180516318063591197Shigella flexneri 2a str. 301, complete genomeputative oxidoreductase5e-69261
NC_000913:1517051:1517051151705115180881038Escherichia coli K12, complete genomepredicted oxidoreductase, Zn-dependent and NAD(P)-binding4e-69261
NC_010473:1607646:1607646160764616086831038Escherichia coli str. K-12 substr. DH10B, complete genomepredicted oxidoreductase, Zn-dependent and NAD(P)-binding4e-69261
NC_012759:1409086:1409086140908614101471062Escherichia coli BW2952 chromosome, complete genomeputative oxidoreductase, Zn-dependent and NAD(P)-binding4e-69261
NC_013508:876431:8832918832918843221032Edwardsiella tarda EIB202, complete genomeputative NADP-dependent oxidoreductase8e-67254
NC_010551:2007926:201314120131412014139999Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceAlcohol dehydrogenase zinc-binding domain protein6e-63241
NC_012779:916000:918589918589919563975Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-60231
NC_017033:1939507:1961821196182119628611041Frateuria aurantia DSM 6220 chromosome, complete genomeputative NADP-dependent oxidoreductase2e-59229
NC_013169:1759900:1774669177466917756791011Kytococcus sedentarius DSM 20547, complete genomepredicted NADP-dependent oxidoreductase9e-56217
NC_015856:2646816:2646816264681626480181203Collimonas fungivorans Ter331 chromosome, complete genomealcohol dehydrogenase, zinc-binding protein5e-55215
NC_008268:7485710:7495277749527774962871011Rhodococcus sp. RHA1, complete genomepossible NADP-dependent oxidoreductase4e-54211
NC_013235:5127148:5131807513180751328291023Nakamurella multipartita DSM 44233, complete genomeAlcohol dehydrogenase zinc-binding domain protein6e-50198
NC_016027:2580477:2582141258214125831811041Gluconacetobacter xylinus NBRC 3288, complete genomeNADP-dependent oxidoreductase L4BD family1e-48194
NC_014006:1862000:187903318790331880025993Sphingobium japonicum UT26S chromosome 1, complete genomeputative 2-alkenal reductase6e-49194
NC_014722:1497244:151062815106281511338711Burkholderia rhizoxinica HKI 454, complete genomeNADP-DEPENDENT OXIDOREDUCTASE7e-36151
NC_007511:1780500:1783268178326817843111044Burkholderia sp. 383 chromosome 2, complete sequenceZinc-containing alcohol dehydrogenase superfamily1e-1997.4
NC_012982:1569426:1578683157868315796901008Hirschia baltica ATCC 49814, complete genomeAlcohol dehydrogenase zinc-binding domain protein2e-1583.6
NC_011420:2803196:282094828209482821922975Rhodospirillum centenum SW, complete genomeoxidoreductase, zinc-binding dehydrogenase family1e-1067.8
NC_018644:1263891:1275724127572412767251002Alpha proteobacterium HIMB59 chromosome, complete genomeNAD(P)H quinone oxidoreductase, PIG3 family4e-0962.8
NC_007511:1681764:168079416807941681786993Burkholderia sp. 383 chromosome 2, complete sequenceZinc-containing alcohol dehydrogenase superfamily3e-0859.7
NC_019814:678404:693032693032694009978Candidatus Kinetoplastibacterium blastocrithidii (ex StrigomonasNADPH2:quinone reductase1e-0757.8
NC_007778:5079500:508124150812415082239999Rhodopseudomonas palustris HaA2, complete genomeAlcohol dehydrogenase superfamily, zinc-containing1e-0757.8
NC_007492:3801237:381308138130813814076996Pseudomonas fluorescens PfO-1, complete genomeZinc-containing alcohol dehydrogenase superfamily1e-0757.4
NC_014830:3438504:3467438346743834684691032Intrasporangium calvum DSM 43043 chromosome, complete genomeAlcohol dehydrogenase zinc-binding domain protein2e-0757
NC_010571:1459363:146305914630591464036978Opitutus terrae PB90-1, complete genomeAlcohol dehydrogenase zinc-binding domain protein3e-0756.2
NC_018868:4010615:401061540106154011592978Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomezinc-containing alcohol dehydrogenase4e-0755.8
NC_004463:8401060:842278084227808423769990Bradyrhizobium japonicum USDA 110, complete genomeputative quinone oxidoreductase4e-0755.8
NC_015563:1595500:1618735161873516197361002Delftia sp. Cs1-4 chromosome, complete genomeNAD(P)H quinone oxidoreductase, PIG3 family8e-0754.7
NC_010623:1961685:199093119909311991926996Burkholderia phymatum STM815 chromosome 2, complete sequenceAlcohol dehydrogenase zinc-binding domain protein1e-0653.9
NC_010159:2955562:2976631297663129776411011Yersinia pestis Angola, complete genomeputative NAD(P)H quinone oxidoreductase, PIG3 family2e-0653.5
NC_009381:2009842:2030314203031420313241011Yersinia pestis Pestoides F chromosome, complete genomeZinc-binding dehydrogenase2e-0653.5
NC_014029:2607666:2628511262851126295211011Yersinia pestis Z176003 chromosome, complete genomeZinc-binding dehydrogenase2e-0653.5
NC_017265:1715035:1715035171503517160451011Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative Zinc-binding dehydrogenase2e-0653.5
NC_015723:1047418:105404310540431055023981Cupriavidus necator N-1 chromosome 2, complete sequencequinone oxidoreductase Qor2e-0653.5
NC_011992:889985:8941338941338951371005Acidovorax ebreus TPSY, complete genomeNAD(P)H quinone oxidoreductase, PIG3 family4e-0652.4
NC_016612:5231065:527327052732705274250981Klebsiella oxytoca KCTC 1686 chromosome, complete genomeNAD(P)H quinone oxidoreductase, PIG3 family protein5e-0652
NC_007412:110698:1294231294231313421920Anabaena variabilis ATCC 29413 plasmid C, complete sequenceZinc-containing alcohol dehydrogenase superfamily7e-0652
NC_015379:3175500:317867831786783179652975Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative zinc-binding oxidoreductase8e-0651.6