Pre_GI: BLASTP Hits

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Query: NC_015410:2838132:2860122 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 2860122, End: 2860208, Length: 87

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:2337024:23382122338212233830190Pseudomonas mendocina ymp, complete genometRNA-Ser6e-0856.2
NC_004129:2034500:20420892042089204217890Pseudomonas fluorescens Pf-5, complete genometRNA-Ser3e-0753.9
NC_016830:4809210:48237234823723482380987Pseudomonas fluorescens F113 chromosome, complete genometRNA-Ser3e-0753.5
NC_014500:3023762:30311823031182303127190Dickeya dadantii 3937 chromosome, complete genometRNA-Ser3e-0753.5
NC_013592:1730505:17543831754383175447290Dickeya dadantii Ech586, complete genometRNA-Ser7e-0752.8
NC_012912:1788308:18170891817089181717890Dickeya zeae Ech1591, complete genometRNA-Ser7e-0752.8
NC_012660:5121219:51349375134937513502387Pseudomonas fluorescens SBW25 chromosome, complete genometRNA-Ser1e-0651.6
NC_015703:3842144:38572773857277385736690Runella slithyformis DSM 19594 chromosome, complete genometRNA-Ser2e-0651.2
NC_007005:2149275:21619072161907216199690Pseudomonas syringae pv. syringae B728a, complete genometRNA-Ser2e-0650.8
NC_013421:3117639:31257093125709312579890Pectobacterium wasabiae WPP163, complete genometRNA-Ser4e-0650.1
NC_012917:2921932:29259772925977292606690Pectobacterium carotovorum subsp. carotovorum PC1, complete genometRNA-Ser4e-0650.1
NC_004547:1970686:19891321989132198922190Erwinia carotovora subsp. atroseptica SCRI1043, complete genometRNA-Ser4e-0650.1
NC_017047:1796000:17966461796646179673590Rahnella aquatilis HX2 chromosome, complete genometRNA-Ser7e-0649.3
NC_017047:1796000:17960761796076179616590Rahnella aquatilis HX2 chromosome, complete genometRNA-Ser7e-0649.3