Pre_GI Gene

Some Help

Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:4809210 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
48092104810106897beta-lactamase class C-related penicillin binding proteinQuickGO ontologyBLASTP
48102944810917624cell wall assembly cell proliferation coordinating knr4-like proteinQuickGO ontologyBLASTP
48110074811621615alpha beta hydrolase fold proteinQuickGO ontologyBLASTP
48117034812518816hypothetical proteinBLASTP
481251548136121098Sterol desaturaseQuickGO ontologyBLASTP
48137134814201489GNAT family acetyltransferaseQuickGO ontologyBLASTP
48143384815141804diaminopimelate epimeraseQuickGO ontologyBLASTP
48151324815515384glyoxalase bleomycin resistance protein dioxygenaseQuickGO ontology
48155564816119564acetyltransferase including N-acetylaseof ribosomal proteinQuickGO ontologyBLASTP
48161694816567399hypothetical proteinBLASTP
48169954817483489helix-turn-helix dna-binding domain proteinQuickGO ontologyBLASTP
48174804817809330toxin-antitoxin toxin familyQuickGO ontologyBLASTP
48179654818315351response regulator receiver domain-containing protein CheY-likeQuickGO ontologyBLASTP
48186154818983369hypothetical proteinBLASTP
48190844819410327araC family transcriptional regulatorQuickGO ontologyBLASTP
48199854820212228phage integraseQuickGO ontology
48203544820830477ketosteroid isomerase-like proteinQuickGO ontologyBLASTP
482109748222991203major facilitator family transporterQuickGO ontologyBLASTP
4823723482380987tRNA-SerQuickGO ontologyBLASTP
48241184824807690Enoyl-CoA hydrataseisomerase family proteinQuickGO ontologyBLASTP
48253614826083723protein PatBQuickGO ontologyBLASTP
48262204827191972magnesium and cobalt transport proteinQuickGO ontologyBLASTP
48272804828014735glutamine amidotransferaseQuickGO ontologyBLASTP
4828104483024821453-hydroxybutyryl-CoA epimeraseQuickGO ontologyBLASTP
4830275483155212783-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
48320884832900813cytochrome c mono- and diheme variantQuickGO ontologyBLASTP