Pre_GI: BLASTP Hits

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Query: NC_013316:81969:85108 Clostridium difficile R20291, complete genome

Start: 85108, End: 85410, Length: 303

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014220:2265882:228001622800162280816801Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomethymidylate synthase, flavin-dependent5e-25112
NC_009633:4563877:459844945984494599222774Alkaliphilus metalliredigens QYMF chromosome, complete genomeFAD-dependent thymidylate synthase4e-24109
NC_008593:196257:214749214749215483735Clostridium novyi NT, complete genomethymidylate synthase, flavin-dependent6e-2199.4
NC_014614:2333890:233389023338902334660771Clostridium sticklandii, complete genomeThymidylate synthase thyX (TS) (TSase)4e-2096.7
NC_015425:198315:219428219428220162735Clostridium botulinum BKT015925 chromosome, complete genomethymidylate synthase, flavin-dependent5e-2096.3
NC_008262:2598920:263908926390892639826738Clostridium perfringens SM101, complete genomethymidylate synthase, flavin-dependent1e-1685.1
NC_010516:3759136:379838037983803799132753Clostridium botulinum B1 str. Okra, complete genomethymidylate synthase, flavin-dependent1e-1684.7
NC_012563:3956500:399530939953093996061753Clostridium botulinum A2 str. Kyoto, complete genomethymidylate synthase, flavin-dependent1e-1684.7
NC_010520:3788702:382798138279813828733753Clostridium botulinum A3 str. Loch Maree, complete genomethymidylate synthase, flavin-dependent1e-1684.7
NC_021182:4557608:459649345964934597302810Clostridium pasteurianum BC1, complete genomethymidylate synthase, flavin-dependent2e-1581.3
NC_014652:757381:773704773704774495792Caldicellulosiruptor hydrothermalis 108 chromosome, completethymidylate synthase, flavin-dependent1e-1375.5
NC_014392:1935130:195234119523411953132792Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomethymidylate synthase, flavin-dependent2e-1374.7
NC_010424:214640:217073217073217810738Candidatus Desulforudis audaxviator MP104C, complete genomethymidylate synthase, flavin-dependent7e-1165.9
NC_015672:2071141:208616420861642086898735Flexistipes sinusarabici DSM 4947 chromosome, complete genomeThymidylate synthase thyX1e-0962
NC_013939:106681:109399109399110130732Deferribacter desulfuricans SSM1, complete genomeFAD-dependent thymidylate synthase1e-0755.5