Pre_GI: BLASTP Hits

Some Help

Query: NC_012125:2938519:2940644 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2940644, End: 2940988, Length: 345

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:2912219:291435929143592914703345Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein9e-62234
NC_011080:2982346:298234629823462982690345Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-61233
NC_006511:2819128:282126828212682821612345Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-61233
NC_003198:2856596:285873628587362859080345Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-61233
NC_011083:2980356:298035629803562980700345Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-61233
NC_004631:2842453:284459328445932844937345Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-61233
NC_010102:2967464:296971529697152970059345Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-61233
NC_011147:2814664:281680428168042817148345Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-61233
NC_011205:3050235:305023530502353050579345Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-61233
NC_016832:2829767:283189228318922832236345Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-61233
NC_003197:3005842:300584230058423006186345Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein5e-61232
NC_016810:3028421:302842130284213028765345Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-61232
NC_016857:3028421:302842130284213028765345Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74YgbA protein5e-61232
NC_016860:3029272:302927230292723029616345Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-61232
NC_016863:2974333:297433329743332974677345Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein5e-61232
NC_017046:3027161:302716130271613027505345Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-61232
NC_011294:2890500:289050128905012890845345Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-61232
NC_016831:2867766:286776628677662868110345Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-61232
NC_006905:2960260:296026029602602960604345Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein9e-61231
NC_011274:2881306:288130628813062881650345Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-60230
NC_015761:2726000:272607927260792726423345Salmonella bongori NCTC 12419, complete genomehypothetical protein7e-57218
NC_010067:84093:107436107436107780345Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-55214
NC_008253:2828573:283450028345002834844345Escherichia coli 536, complete genomehypothetical protein YgbA1e-54211
NC_009801:3013838:301964430196443019997354Escherichia coli E24377A, complete genomehypothetical protein4e-54209
NC_012912:2216749:224042022404202240821402Dickeya zeae Ech1591, complete genomehypothetical protein6e-34142
NC_012880:2425330:242533024253302425725396Dickeya dadantii Ech703, complete genomehypothetical protein6e-30129
NC_008577:4611431:461505046150504615451402Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein2e-1994
NC_007759:1028977:107173710717371072102366Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein8e-1992.4
NC_014314:212579:233605233605233991387Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein4e-1889.7
NC_009092:261778:278814278814279215402Shewanella loihica PV-4, complete genomehypothetical protein2e-1787.8
NC_014624:2549219:256686725668672567166300Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein5e-1786.3
NC_014960:1950648:196518819651881965574387Anaerolinea thermophila UNI-1, complete genomehypothetical protein6e-1476.3
NC_013171:228356:243830243830244165336Anaerococcus prevotii DSM 20548, complete genomehypothetical protein6e-1372.8
NC_017068:1480148:148639014863901486779390Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-1064.7
NC_014758:10687:241022410224419318Calditerrivibrio nitroreducens DSM 19672 chromosome, completehypothetical protein6e-0752.8