Pre_GI: BLASTP Hits

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Query: NC_011205:4718239:4737380 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4737380, End: 4737544, Length: 165

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:4460726:448777644877764488651876Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-26115
NC_004631:4687270:469954046995404700415876Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein9e-26115
NC_012125:4716000:473747647374764738351876Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-25115
NC_006905:4638707:466016146601614661036876Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-25115
NC_011080:4703266:472188447218844722051168Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-25114
NC_011149:4677412:470819447081944709069876Salmonella enterica subsp. enterica serovar Agona str. SL483,HNH nuclease5e-25112
NC_020211:554736:564967564967565842876Serratia marcescens WW4, complete genomeHNH nuclease4e-22103
NC_014121:677799:695610695610696479870Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein8e-2199
NC_016514:506611:527739527739528614876Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-2097.8
NC_009436:522649:545015545015545908894Enterobacter sp. 638, complete genomehypothetical protein5e-1889.7
NC_008253:4817864:484076148407614841633873Escherichia coli 536, complete genomehypothetical protein9e-1889
NC_007613:4403070:440931644093164410188873Shigella boydii Sb227, complete genomehypothetical protein9e-1889
NC_009801:4882684:489775948977594898631873Escherichia coli E24377A, complete genomehypothetical protein9e-1889
CP002516:4199133:421402542140254214897873Escherichia coli KO11, complete genomeputative restriction endonuclease9e-1889
CP002185:4791811:479797347979734798845873Escherichia coli W, complete genomeputative restriction endonuclease9e-1889
NC_016902:4199133:421402542140254214897873Escherichia coli KO11FL chromosome, complete genomeputative restriction endonuclease9e-1889
NC_013364:5255700:526567852656785266550873Escherichia coli O111:H- str. 11128, complete genomeputative restriction endonuclease8e-1889
NC_011601:4856717:487357148735714874476906Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerestriction endonuclease8e-1889
NC_007946:4875997:490026349002634901168906Escherichia coli UTI89, complete genomehypothetical protein8e-1889
NC_008563:4905186:491649249164924917397906Escherichia coli APEC O1, complete genomehypothetical protein8e-1889
NC_011750:4978000:498298549829854983914930Escherichia coli IAI39 chromosome, complete genomehypothetical protein8e-1889
NC_009800:4529504:454053345405334541405873Escherichia coli HS, complete genomehypothetical protein9e-1889
NC_002655:5382557:538881053888105389694885Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-1788.2
NC_013941:5192500:519707251970725197956885Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1787.8
NC_013008:5382917:538851653885165389367852Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1787.8
NC_011353:5426793:543245554324555433306852Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeHNH nuclease2e-1787.8
NC_002695:5352554:535880753588075359658852Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1787.8
NC_016845:575123:598562598562599431870Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-1787
NC_013850:4829455:483627748362774837146870Klebsiella variicola At-22 chromosome, complete genomehypothetical protein3e-1787
NC_011283:4966471:497394749739474974816870Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein3e-1787
NC_014306:4376012:439702443970244397896873Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein5e-1786.3
NC_010498:4899167:490680749068074907679873Escherichia coli SMS-3-5, complete genomehypothetical protein5e-1786.3
CP002185:4750571:475615847561584757033876Escherichia coli W, complete genomehypothetical protein9e-1785.5
NC_016816:3952000:395795439579543958823870Pantoea ananatis LMG 5342, complete genomeHNH nuclease1e-1685.1
NC_016818:4215836:423289242328924233764873Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative restriction endonuclease1e-1684.7
NC_013421:1819036:182912118291211829996876Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-1581.6
NC_013353:5272863:529110352911035291279177Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-1580.9
AP010958:5272863:529110352911035291279177Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-1580.9
NC_020418:116500:120817120817121689873Morganella morganii subsp. morganii KT, complete genomehypothetical protein7e-1579.3
NC_012912:4167429:418072641807264181598873Dickeya zeae Ech1591, complete genomehypothetical protein7e-1579.3
NC_013361:5580741:558415055841505584368219Escherichia coli O26:H11 str. 11368 chromosome, complete genome6e-1579.3
NC_010067:3056774:307063430706343071506873Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-1579
NC_014012:2411096:241959224195922420461870Shewanella violacea DSS12, complete genomehypothetical protein4e-0960.1
NC_012914:336750:353362353362353565204Paenibacillus sp. JDR-2, complete genomehypothetical protein2e-0650.8