Pre_GI: BLASTP Hits

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Query: NC_011094:4361238:4394940 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 4394940, End: 4395398, Length: 459

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:4405301:443899744389974439455459Salmonella enterica subsp. enterica serovar Choleraesuis strredox-sensing transcriptional activator SoxR, contains iron-sulfur center for redox-sensing (MerR family)3e-84309
NC_010067:3310336:331693133169313317389459Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-82302
NC_020181:3585898:360470636047063605164459Enterobacter aerogenes EA1509E, complete genomeRedox-sensitive transcriptional activator SoxR9e-74275
NC_008314:2611873:262853026285302629084555Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, SoxR-family2e-45180
NC_002927:4392768:441490944149094415373465Bordetella bronchiseptica RB50, complete genomeputative MerR-family transcriptional regulator2e-43174
NC_014153:2125551:212955021295502130035486Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, MerR family6e-38155
NC_014210:2372813:239050823905082390975468Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, MerR family9e-35145
NC_019673:7598026:761095576109557611416462Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, MerR family3e-34143
NC_009480:739395:751420751420751908489Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein3e-31134
NC_014550:2091797:211753021175302118036507Arthrobacter arilaitensis Re117, complete genomeputative redox-sensitive transcriptional regulator SoxR3e-30130
NC_016111:5369414:537814953781495378634486Streptomyces cattleya NRRL 8057, complete genomeHTH-type transcriptional activator soxR-like protein1e-29128
NC_014623:9089998:909611190961119096548438Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeMerR family transcriptional regulator9e-1269.3
NC_013166:82986:944679446794919453Kangiella koreensis DSM 16069, complete genometranscriptional regulator, MerR family1e-1168.9
NC_015957:7348269:736371973637197364141423Streptomyces violaceusniger Tu 4113 chromosome, complete genomeMerR family transcriptional regulator6e-1166.6
NC_009425:63709:883968839688821426Enterobacter sp. 638 plasmid pENTE01, complete sequenceMerR family transcriptional regulator7e-1166.2
NC_015731:1578106:160221816022181602658441Nitrosomonas sp. Is79A3 chromosome, complete genomeMarR family transcriptional regulator1e-1065.5
NC_009668:529175:531374531374531790417Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMerR family transcriptional regulator1e-1065.1
NC_012483:1408500:144328314432831443693411Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, MerR family1e-1065.1
NC_008702:2892605:289957428995742900011438Azoarcus sp. BH72, complete genomeprobable redox-sensitive transcriptional activator5e-1063.5
NC_012724:1308000:132249213224921322923432Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, MerR family protein1e-0962.4
NC_014815:5888934:589270858927085893130423Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, merr family8e-0959.3
NC_016114:648422:652656652656653057402Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeMerR family transcriptional regulator8e-0959.3
NC_011992:1179084:119333011933301193809480Acidovorax ebreus TPSY, complete genometranscriptional regulator, MerR family4e-0857
NC_015733:4130000:413477841347784135200423Pseudomonas putida S16 chromosome, complete genomeMerR family transcriptional regulator7e-0856.2
NC_010611:208268:225980225980226384405Acinetobacter baumannii ACICU, complete genomepredicted transcriptional regulator9e-0855.8
NC_016113:994469:100038710003871000770384Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceMerR family transcriptional regulator3e-0754.3
NC_010410:3719599:372359937235993724003405Acinetobacter baumannii AYE, complete genomeputative transcriptional regulator (MerR family)4e-0753.9
NC_011894:4911500:492472249247224925156435Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, MerR family5e-0753.5
NC_020911:3475096:347754534775453477955411Octadecabacter antarcticus 307, complete genomeputative HTH-type transcriptional regulator5e-0753.1
NC_009439:918534:924888924888925319432Pseudomonas mendocina ymp, complete genomeMerR family transcriptional regulator6e-0753.1
NC_010501:3987615:399225639922563992669414Pseudomonas putida W619, complete genometranscriptional regulator, MerR family7e-0752.8
NC_014210:144036:146517146517146933417Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, MerR family1e-0652.4
NC_016906:4562874:456287445628744563290417Gordonia polyisoprenivorans VH2 chromosome, complete genomeMerR family transcriptional regulator1e-0652
NC_008027:1847040:186647118664711866866396Pseudomonas entomophila L48, complete genometranscriptional regulator2e-0651.2
NC_014831:1906691:193368319336831934192510Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, MerR family2e-0651.2
NC_002947:4362271:436476643647664365137372Pseudomonas putida KT2440, complete genometranscriptional regulator, MerR family2e-0651.2
NC_016114:1:137711377114121351Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeMerR family transcriptional regulator3e-0650.8
NC_011083:403022:447987447987448451465Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,Cu(I)-responsive transcriptional regulator3e-0650.8
NC_011080:383441:405320405320405784465Salmonella enterica subsp. enterica serovar Newport str. SL254,Cu(I)-responsive transcriptional regulator3e-0650.8
NC_011149:361765:383657383657384121465Salmonella enterica subsp. enterica serovar Agona str. SL483,Cu(I)-responsive transcriptional regulator3e-0650.8
NC_012125:373630:395509395509395973465Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator3e-0650.8
NC_010804:996837:103990310399031040310408Burkholderia multivorans ATCC 17616 chromosome 1, completeMerR family mercuric resistance operon regulatory protein3e-0650.8
NC_010084:2484000:248446324844632484870408Burkholderia multivorans ATCC 17616 chromosome 1, completeMerR family transcriptional regulator3e-0650.8
NC_009664:63230:673906739067755366Kineococcus radiotolerans SRS30216, complete genomeputative transcriptional regulator, MerR family4e-0650.4
NC_007498:1848437:186231018623101862723414Pelobacter carbinolicus DSM 2380, complete genomeputative heavy metal regulator HmrR4e-0650.4
NC_011274:376970:398848398848399312465Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator3e-0650.4
NC_018524:4848154:488515148851514885528378Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomemerR regulatory family protein4e-0650.1
NC_021066:839734:8665688665688676141047Raoultella ornithinolytica B6, complete genomealbicidin resistance protein5e-0650.1
NC_016616:1091606:109800110980011098429429Dechlorosoma suillum PS chromosome, complete genomeCu(I)-responsive transcriptional regulator7e-0649.7
NC_008782:2857899:286344128634412863956516Acidovorax sp. JS42, complete genomeputative transcriptional regulator, MerR family7e-0649.7
NC_015422:2858228:286535728653572865800444Alicycliphilus denitrificans K601 chromosome, complete genomeMerR family transcriptional regulator8e-0649.3