Pre_GI Gene

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Host: NC_009480 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009480:739395 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
739395740333939hypothetical proteinBLASTP
740336740920585putative serine O-acetyltransferaseQuickGO ontologyBLASTP
740920741579660putative RNA methyltransferaseQuickGO ontologyBLASTP
741611742171561hypothetical proteinBLASTP
742168742569402hypothetical proteinBLASTP
742620743141522putative endoribonuclease L-PSPQuickGO ontologyBLASTP
7431607441611002putative adenosine deaminaseQuickGO ontologyBLASTP
744239744547309hypothetical protein
7453387486283291hypothetical proteinBLASTP
7487847498301047NADP-dependent alcohol dehydrogenaseQuickGO ontologyBLASTP
7499847513691386putative carboxylesterase type BQuickGO ontologyBLASTP
751420751908489hypothetical proteinBLASTP
752015752341327hypothetical proteinBLASTP
752338752832495putative flavin-dependant reductaseQuickGO ontologyBLASTP
7528697547941926putative secreted phosphoesteraseQuickGO ontologyBLASTP
755391756011621conserved hypothetical protein putative phosphohydrolaseQuickGO ontologyBLASTP
756008756292285hypothetical protein
756289756963675hypothetical protein
7570507591552106hypothetical proteinBLASTP
759152759820669hypothetical protein with ATPase domainQuickGO ontology
759817760500684putative transcriptional regulator TetR-familyQuickGO ontology