Pre_GI: BLASTN Hits

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Query: NC_010610:1765000 Lactobacillus fermentum IFO 3956, complete genome

Start: 1765000, End: 1793448, Length: 28449

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010610:79597579597582885432880Lactobacillus fermentum IFO 3956, complete genome03188BLASTN svgBLASTP svg
NC_010610:11784301178430122897750548Lactobacillus fermentum IFO 3956, complete genome03188BLASTN svgBLASTP svg
NC_010610:90845290845293309924648Lactobacillus fermentum IFO 3956, complete genome03140BLASTN svgBLASTP svg
NC_010610:16495001649500167265923160Lactobacillus fermentum IFO 3956, complete genome03079BLASTN svgBLASTP svg
NC_010610:20136592013659205177738119Lactobacillus fermentum IFO 3956, complete genome02993BLASTN svgBLASTP svg
NC_010610:1580483*1580483162924448762Lactobacillus fermentum IFO 3956, complete genome02520BLASTN svgBLASTP svg
NC_010610:1385066*1385066141573130666Lactobacillus fermentum IFO 3956, complete genome02510BLASTN svgBLASTP svg
NC_010610:86119486119488392322730Lactobacillus fermentum IFO 3956, complete genome02502BLASTN svgBLASTP svg
NC_010610:755000*75500078559930600Lactobacillus fermentum IFO 3956, complete genome02274BLASTN svgBLASTP svg
NC_010610:10750010750013485227353Lactobacillus fermentum IFO 3956, complete genome02169BLASTN svgBLASTP svg
NC_008526:50626350626352818721925Lactobacillus casei ATCC 334, complete genome02030BLASTN svgBLASTP svg
NC_008526:56590256590259093225031Lactobacillus casei ATCC 334, complete genome02028BLASTN svgBLASTP svg
NC_008526:19735001973500199344619947Lactobacillus casei ATCC 334, complete genome02028BLASTN svgBLASTP svg
NC_008526:23731902373190239665623467Lactobacillus casei ATCC 334, complete genome02024BLASTN svgBLASTP svg
NC_008526:34344534344536727223828Lactobacillus casei ATCC 334, complete genome02014BLASTN svgBLASTP svg
NC_014334:49330849330851458821281Lactobacillus casei str. Zhang chromosome, complete genome02008BLASTN svgBLASTP svg
NC_014334:36997436997439377323800Lactobacillus casei str. Zhang chromosome, complete genome02008BLASTN svgBLASTP svg
NC_014334:58952658952661259823073Lactobacillus casei str. Zhang chromosome, complete genome02006BLASTN svgBLASTP svg
NC_014334:19543331954333198420029868Lactobacillus casei str. Zhang chromosome, complete genome01933BLASTN svgBLASTP svg
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome01824BLASTN svgBLASTP svg
NC_010610:269380*26938029559926220Lactobacillus fermentum IFO 3956, complete genome01770BLASTN svgBLASTP svg
NC_010999:34925234925236774518494Lactobacillus casei, complete genome01364BLASTN svgBLASTP svg
NC_015697:33665*336655730923645Lactobacillus reuteri SD2112 chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_015697:742500*74250076857626077Lactobacillus reuteri SD2112 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009513:169146*16914619195222807Lactobacillus reuteri F275, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015697:46823446823449009821865Lactobacillus reuteri SD2112 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015697:256000*25600027836622367Lactobacillus reuteri SD2112 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014228:4408500*4408500443149923000Xenorhabdus nematophila ATCC 19061, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014228:4360676*4360676438499224317Xenorhabdus nematophila ATCC 19061, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008529:918277*91827794411525839Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete8e-0763.9BLASTN svgBLASTP svg
NC_008529:906576*90657697782071245Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete8e-0763.9BLASTN svgBLASTP svg
NC_008529:887008*88700895284265835Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete8e-0763.9BLASTN svgBLASTP svg
NC_008054:93089093089095243521546Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete8e-0763.9BLASTN svgBLASTP svg
NC_013199:811929*81192983409922171Lactobacillus rhamnosus Lc 705, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013198:813830*81383083545121622Lactobacillus rhamnosus GG, complete genome3e-0661.9BLASTN svgBLASTP svg