Pre_GI: BLASTP Hits

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Query: NC_010067:84093:98438 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 98438, End: 98743, Length: 306

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2974333:298424129842412984546306Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex minor subunit9e-50195
NC_010102:2967464:297873329787332979038306Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-50195
NC_003197:3005842:301575130157513016056306Salmonella typhimurium LT2, complete genomeneedle complex minor subunit9e-50195
NC_006905:2960260:296927829692782969583306Salmonella enterica subsp. enterica serovar Choleraesuis strcell invasion protein; cytoplasmic9e-50195
NC_006511:2819128:283029728302972830602306Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpathogenicity 1 island effector protein9e-50195
NC_011094:2913500:292295729229572923262306Salmonella enterica subsp. enterica serovar Schwarzengrund strprotein PrgJ9e-50195
NC_011147:2814664:282583328258332826138306Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island 1 effector protein9e-50195
NC_011205:3050235:306014230601423060447306Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein9e-50195
NC_011274:2881306:289121528912152891520306Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity 1 island effector protein9e-50195
NC_011294:2890500:290041029004102900715306Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity 1 island effector protein9e-50195
NC_016810:3028421:303832730383273038632306Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus9e-50195
NC_016856:3026426:303598830359883036293306Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex minor subunit9e-50195
NC_016857:3028421:303832730383273038632306Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex minor subunit9e-50195
NC_016860:3029272:303918130391813039486306Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity 1 island effector protein9e-50195
NC_004631:2842453:285362228536222853927306Salmonella enterica subsp. enterica serovar Typhi Ty2, completepathogenicity 1 island effector protein1e-49194
NC_003198:2856596:286776528677652868070306Salmonella enterica subsp. enterica serovar Typhi str. CT18,pathogenicity 1 island effector protein1e-49194
NC_015761:2726000:273598027359802736285306Salmonella bongori NCTC 12419, complete genomepathogenicity 1 island effector protein4e-49192
NC_017046:3027161:303706730370673037309243Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system apparatus2e-39160
NC_016831:2867766:287767428776742877916243Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity 1 island effector protein2e-39160
NC_012125:2938519:294966229496622949904243Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic cell invasion protein2e-39160
NC_011083:2980356:299026529902652990507243Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protein PrgJ2e-39160
NC_011080:2982346:299225529922552992497243Salmonella enterica subsp. enterica serovar Newport str. SL254,protein PrgJ2e-39160
NC_011149:2912219:292427929242792924521243Salmonella enterica subsp. enterica serovar Agona str. SL483,protein PrgJ2e-39160
NC_016832:2829767:284092128409212841163243Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-39158
NC_013961:851044:860320860320860643324Erwinia amylovora, complete genomeProtein PrgJ3e-0753.5
NC_011751:3285646:330416033041603304492333Escherichia coli UMN026 chromosome, complete genomeputative type III secretion apparatus protein5e-0649.7
NC_010468:906957:922076922076922408333Escherichia coli ATCC 8739, complete genomehypothetical protein5e-0649.7
NC_013008:3761467:377905837790583779390333Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeType III secretion apparatus protein7e-0649.3
NC_011353:3805819:382433238243323824664333Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus protein EprJ7e-0649.3
NC_002655:3769643:378723537872353787567333Escherichia coli O157:H7 EDL933, complete genomeputative Type III secretion apparatus protein7e-0649.3
NC_002695:3702344:371993537199353720267333Escherichia coli O157:H7 str. Sakai, complete genomeEprJ7e-0649.3