Pre_GI: BLASTP Hits

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Query: NC_009708:2392640:2409887 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2409887, End: 2411605, Length: 1719

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:2428620:2445854244585424475721719Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein01178
NC_017265:2263347:2280620228062022822781659Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein01133
NC_014029:2335021:2353650235365023553081659Yersinia pestis Z176003 chromosome, complete genomehypothetical protein01133
NC_004088:2541033:2559662255966225613201659Yersinia pestis KIM, complete genomehypothetical protein01133
NC_011149:1987291:2032506203250620342361731Salmonella enterica subsp. enterica serovar Agona str. SL483,putative periplasmic protein7e-154544
NC_016831:947281:9496409496409513701731Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-152539
NC_011294:2053991:2092084209208420938141731Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-152539
NC_011274:2044000:2083217208321720849471731Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-152538
NC_011205:2180598:2219097221909722208271731Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-151536
NC_010102:997417:9974179974179991471731Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-151534
NC_008258:401786:4087054087054104351731Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-126454
NC_017328:385552:3924713924713942011731Shigella flexneri 2002017 chromosome, complete genomehypothetical protein3e-126452
NC_004337:367687:3746073746073763371731Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-126452
NC_004741:366822:3737413737413754711731Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-126452