Pre_GI: BLASTP Hits

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Query: NC_009438:236424:247986 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 247986, End: 249230, Length: 1245

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018678:554675:5773025773025785851284Alteromonas macleodii str. 'English Channel 673' chromosome,cobalt-zinc-cadmium cation efflux system outer membrane protein, CzcC family1e-33144
NC_009659:1984980:2003846200384620051351290Janthinobacterium sp. Marseille chromosome, complete genomecobalt-zinc-cadmium outer membrane resistance protein czcC2e-1067.4
NC_014323:5051041:5070673507067350719591287Herbaspirillum seropedicae SmR1 chromosome, complete genomecobalt-zinc-cadmium resistance cation efflux system outer membrane protein3e-0963.5
NC_015740:1291739:1303598130359813048391242Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completecobalt-zinc-cadmium resistance protein CzcC3e-1376.6
NC_009138:1583988:1587664158766415889621299Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcC precursor (Cation efflux system protein czcC)7e-1788.6
NC_009434:3611738:3697189369718936984301242Pseudomonas stutzeri A1501, complete genomecobalt-zinc-cadmium resistance protein CzcC, putative5e-1375.9
NC_002947:8394:5071850718519891272Pseudomonas putida KT2440, complete genomecobalt/zinc/cadmium efflux RND transporter, outer membrane protein, CzcC family2e-1170.5
NC_018697:1343756:1385862138586213871721311Cycloclasticus sp. P1 chromosome, complete genomeCobalt/zinc/cadmium efflux RND transporter,outermembrane protein1e-107390
NC_009138:519965:5232805232805245691290Herminiimonas arsenicoxydans, complete genomedivalent cation efflux system periplasmic protein CzcC2e-1377.4
NC_002939:2315402:2354577235457723558901314Geobacter sulfurreducens PCA, complete genomemetal ion efflux outer membrane protein family protein, putative5e-1789.4
NC_002939:2337402:2354577235457723558901314Geobacter sulfurreducens PCA, complete genomemetal ion efflux outer membrane protein family protein, putative5e-1789.4
NC_010170:4800000:4868326486832648696151290Bordetella petrii, complete genomemetal ion efflux outer membrane protein, putative8e-1995.1
NC_009659:1923925:1943190194319019444971308Janthinobacterium sp. Marseille chromosome, complete genomeouter membrane cation efflux protein8e-0755.5
NC_009485:7626677:7633328763332876346021275Bradyrhizobium sp. BTAi1 chromosome, complete genomeouter membrane cobalt-zinc-cadmium resistance protein czcC2e-31136
NC_018868:619113:6410036410036423311329Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeouter membrane efflux protein2e-88326
NC_007520:2305610:2320746232074623220531308Thiomicrospira crunogena XCL-2, complete genomeOuter membrane efflux protein4e-35149
NC_009720:4406991:4406991440699144082621272Xanthobacter autotrophicus Py2, complete genomeouter membrane efflux protein4e-26119
NC_007958:2370619:2400563240056324018341272Rhodopseudomonas palustris BisB5, complete genomeouter membrane efflux protein9e-21101
NC_015422:3513689:3533957353395735352581302Alicycliphilus denitrificans K601 chromosome, complete genomeouter membrane efflux protein2e-1273.6
NC_015222:523915:5445795445795460061428Nitrosomonas sp. AL212 chromosome, complete genomeouter membrane efflux protein2e-1067
NC_012982:711122:7591397591397604251287Hirschia baltica ATCC 49814, complete genomeouter membrane efflux protein5e-0859.3
NC_009138:1544835:1549474154947415507811308Herminiimonas arsenicoxydans, complete genomeOuter membrane efflux protein8e-0652
NC_011138:318168:3343263343263355281203Alteromonas macleodii 'Deep ecotype', complete genomeOuter membrane efflux protein6e-30132
NC_011004:2457778:2488205248820524894761272Rhodopseudomonas palustris TIE-1, complete genomeouter membrane efflux protein2e-21103
NC_008782:1917634:1928110192811019294651356Acidovorax sp. JS42, complete genomeouter membrane efflux protein3e-1686.3
NC_008347:2515921:2533414253341425347001287Maricaulis maris MCS10, complete genomeouter membrane efflux protein9e-1375.1
NC_010501:30000:6741067410686811272Pseudomonas putida W619, complete genomeouter membrane efflux protein2e-1170.5
NC_014910:242845:2515782515782529031326Alicycliphilus denitrificans BC chromosome, complete genomeouter membrane efflux protein1e-0861.2
NC_015554:1653614:1654996165499616564231428Alteromonas sp. SN2 chromosome, complete genomeouter membrane efflux protein3e-56219
NC_011004:2507566:2529112252911225303831272Rhodopseudomonas palustris TIE-1, complete genomeouter membrane efflux protein6e-23108
NC_011146:2200142:2240273224027322415711299Geobacter bemidjiensis Bem, complete genomeouter membrane efflux protein1e-1687.8
NC_010322:29983:6347663476647471272Pseudomonas putida GB-1 chromosome, complete genomeouter membrane efflux protein2e-1170.5
NC_009512:27783:6269462694638781185Pseudomonas putida F1, complete genomeouter membrane efflux protein2e-1067.8
NC_013446:2820000:2835724283572428370011278Comamonas testosteroni CNB-2, complete genomeouter membrane efflux protein7e-0962
NC_008345:4107847:4107847410784741091961350Shewanella frigidimarina NCIMB 400, complete genomeouter membrane efflux protein7e-87321
NC_009720:670853:6901676901676914831317Xanthobacter autotrophicus Py2, complete genomeouter membrane efflux protein7e-24112
NC_012968:1594954:1626466162646616277311266Methylotenera mobilis JLW8, complete genomeouter membrane efflux protein1e-1688.2
NC_010002:1879220:1906105190610519074361332Delftia acidovorans SPH-1, complete genomeouter membrane efflux protein1e-1171.2
NC_017986:2548720:2596893259689325980771185Pseudomonas putida ND6 chromosome, complete genomeouter membrane efflux protein2e-1170.5
NC_008752:2724977:2740441274044127417511311Acidovorax avenae subsp. citrulli AAC00-1, complete genomeouter membrane efflux protein6e-0755.8
NC_009439:1297851:1323417132341713246671251Pseudomonas mendocina ymp, complete genomeouter membrane efflux protein9e-0651.6
NC_011753:1501868:1518258151825815195711314Vibrio splendidus LGP32 chromosome 1, complete genomeouter membrane protein4e-0652.8
NC_010943:2465976:2486816248681624880931278Stenotrophomonas maltophilia K279a, complete genomeputative cobalt-zinc-cadmium resistance protein2e-40167