Pre_GI: BLASTP Hits

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Query: NC_008563:3362058:3377315 Escherichia coli APEC O1, complete genome

Start: 3377315, End: 3378091, Length: 777

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:3530954:355054535505453551381837Escherichia coli UMN026 chromosome, complete genomepolysialic acid transport protein3e-136484
NC_012967:3012317:302768530276853028461777Escherichia coli B str. REL606 chromosome, complete genomePolysialic acid transport protein kpsM3e-136484
NC_011745:3511600:352480235248023525638837Escherichia coli ED1a chromosome, complete genomePolysialic acid transport protein4e-136483
NC_004431:3513147:352851635285163529292777Escherichia coli CFT073, complete genomeKpsM protein6e-134476
NC_011742:3277941:329210732921073292943837Escherichia coli S88 chromosome, complete genomePolysialic acid transport protein1e-133475
NC_011750:3584000:359843735984373599273837Escherichia coli IAI39 chromosome, complete genomepolysialic acid transport protein1e-133475
NC_007946:3289151:330440833044083305184777Escherichia coli UTI89, complete genomepolysialic acid transport protein KpsM2e-133474
NC_010498:3291344:330699033069903307766777Escherichia coli SMS-3-5, complete genomepolysialic acid capsule biosynthesis transport protein KpsM2e-133474
NC_017047:1434500:144774914477491448525777Rahnella aquatilis HX2 chromosome, complete genomeABC transporter6e-107387
NC_015061:1481500:149479714947971495573777Rahnella sp. Y9602 chromosome, complete genomeABC transporter6e-107387
NC_014618:586240:595117595117595893777Enterobacter cloacae SCF1 chromosome, complete genomeABC transporter6e-100363
NC_014618:4010689:402792940279294028705777Enterobacter cloacae SCF1 chromosome, complete genomeABC transporter9e-99359
NC_008253:3161311:319554131955413196317777Escherichia coli 536, complete genomepolysialic acid transport protein KpsM7e-98356
NC_020260:3277007:329053632905363291312777Cronobacter sakazakii Sp291, complete genomehypothetical protein6e-86317
NC_009778:3287693:329944232994423300218777Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-85315
NC_013282:646569:651829651829652635807Cronobacter turicensis, complete genomePolysialic acid transport protein kpsM2e-83308
NC_010170:2374852:238614523861452386930786Bordetella petrii, complete genomepermease component of an ABC exporter involved in polysaccharide export5e-36151
NC_015424:1689500:169825316982531699053801Aeromonas veronii B565 chromosome, complete genomecapsule transport protein KpsM1e-32139
NC_010804:671081:684002684002684817816Burkholderia multivorans ATCC 17616 chromosome 1, completeABC-2 type transport system permease protein1e-32139
NC_014541:475350:496668496668497474807Ferrimonas balearica DSM 9799 chromosome, complete genomeABC-2 type transporter9e-31134
NC_013446:3147202:316967831696783170424747Comamonas testosteroni CNB-2, complete genomeABC-2 type transporter1e-28126
NC_011901:1398376:140228414022841403063780Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeABC 2 transporter integral membrane protein9e-28124
NC_014532:1579419:158808015880801588892813Halomonas elongata DSM 2581, complete genomeABC-type transport system permease protein4e-27121
NC_010336:1248071:125897912589791259773795Francisella philomiragia subsp. philomiragia ATCC 25017, completepolysialic acid transport protein KpsM1e-26120
NC_015596:1511961:152481715248171525593777Sinorhizobium meliloti AK83 chromosome 2, complete sequenceABC transporter2e-26119
NC_017323:689512:704545704545705321777Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceABC transporter7e-26117
NC_009620:1504933:150881115088111509581771Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceABC-2 type transporter8e-26117
NC_018000:3009864:301599630159963016772777Sinorhizobium fredii USDA 257 chromosome, complete genomepolysialic acid transport protein KpsM1e-25116
NC_009620:1504933:152076315207631521545783Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceABC-2 type transporter2e-25116
NC_018000:3009864:302861630286163029386771Sinorhizobium fredii USDA 257 chromosome, complete genomepolysialic acid transport protein KpsM8e-25114
NC_009512:4375452:438320543832054383891687Pseudomonas putida F1, complete genomeABC-2 type transporter5e-25114
NC_008787:1345988:136502313650231365805783Campylobacter jejuni subsp. jejuni 81-176, complete genomecapsular polysaccharide ABC transporter, permease protein5e-25114
NC_016745:3199934:320160132016013202389789Oceanimonas sp. GK1 chromosome, complete genomeABC transporter permease3e-24112
NC_012039:257962:258920258920259696777Campylobacter lari RM2100, complete genomecapsular polysaccharide ABC transporter, permease protein4e-24111
NC_009707:1551412:156805615680561568838783Campylobacter jejuni subsp. doylei 269.97 chromosome, completecapsular polysaccharide ABC transporter permease1e-23110
NC_015596:1511961:151653315165331517303771Sinorhizobium meliloti AK83 chromosome 2, complete sequenceABC transporter2e-23109
NC_012586:922095:944307944307945077771Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceRkpT1, cell surface polysaccharide export ABC-2 transporter3e-23108
NC_016815:1543308:1558994155899415600371044Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceCapsule polysaccharide export inner-membrane protein ctrC9e-23107
NC_015696:758153:769775769775770632858Francisella sp. TX077308 chromosome, complete genomepolysialic acid transport protein KpsM3e-22105
NC_010084:2822295:283995628399562840564609Burkholderia multivorans ATCC 17616 chromosome 1, completeABC-2 type transporter2e-2099.4
NC_012586:922095:935872935872936648777Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceRkpT2, cell surface polysaccharide export ABC-2 transporter1e-1996.7
NC_017512:2161000:217538121753812176178798Neisseria meningitidis WUE 2594, complete genomecapsule export inner-membrane protein CtrC7e-1994.4
NC_017515:76861:812158121582012798Neisseria meningitidis M04-240196 chromosome, complete genomecapsule polysaccharide export inner-membrane protein CtrC2e-1789.7
NC_009430:16500:223392233923136798Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, completehypothetical protein8e-1787.4
NC_008836:1072721:109615610961561096938783Burkholderia mallei NCTC 10229 chromosome II, complete sequencecapsular polysaccharide export inner-membrane protein1e-1687
NC_007434:3588081:361151636115163612298783Burkholderia pseudomallei 1710b chromosome I, complete sequenceCapsule polysaccharide export inner-membrane protein1e-1687
NC_006350:3329477:335291233529123353694783Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative capsular polysaccharide export ABC transporter transmembrane protein1e-1687
NC_006348:2372945:239638023963802397162783Burkholderia mallei ATCC 23344 chromosome 1, complete sequencecapsular polysaccharide export inner-membrane protein1e-1687
NC_009074:3163362:318679731867973187579783Burkholderia pseudomallei 668 chromosome I, complete sequencecapsular polysaccharide export inner-membrane protein1e-1687
NC_009076:3179662:320309732030973203879783Burkholderia pseudomallei 1106a chromosome I, complete sequencecapsular polysaccharide export inner-membrane protein1e-1687
NC_015381:766355:788413788413789204792Burkholderia gladioli BSR3 chromosome 1, complete sequenceCtrC protein2e-1583.2
NC_006526:1472781:148676214867621487586825Zymomonas mobilis subsp. mobilis ZM4, complete genomeABC-2 transporter2e-1583.2
NC_014311:2606434:262454626245462625352807Ralstonia solanacearum PSI07 chromosome, complete genomecapsule polysaccharide export inner-membrane protein ctrC4e-1582
NC_018145:104303:111041111041111856816Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeABC transporter6e-1581.3
NC_011989:1604939:161129116112911612052762Agrobacterium vitis S4 chromosome 1, complete sequencepolysialic acid transport protein8e-1580.9
NC_008751:2988235:301210630121063012942837Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeABC-2 type transporter8e-1580.9
NC_010814:1551624:159771115977111598526816Geobacter lovleyi SZ, complete genomeABC-2 type transporter8e-1580.9
NC_013355:105500:115385115385116179795Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeABC-2 type transporter9e-1580.9
NC_015593:2841856:286911828691182869924807Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeABC-2 type transporter2e-1479.7
NC_014006:2999500:300615830061583006958801Sphingobium japonicum UT26S chromosome 1, complete genomecapsule polysaccharide export inner-membrane protein3e-1479.3
NC_011761:2641481:264740426474042648249846Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completecapsule polysaccharide exporter, inner-membrane protein CtrC3e-1479
NC_017262:1913302:192083119208311921640810Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completeABC transporter1e-1376.6
NC_006677:1596560:162591816259181626718801Gluconobacter oxydans 621H, complete genomeCapsule polysaccharide export inner-membrane protein2e-1375.9
NC_015579:53500:651356513565932798Novosphingobium sp. PP1Y plasmid Lpl, complete sequencecapsular polysaccharide transport system permease protein6e-1374.7
NC_008542:855347:874486874486875313828Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceABC-2 type transporter7e-1374.3
NC_005070:617448:622199622199623020822Synechococcus sp. WH 8102, complete genomepossible ABC transporter involved in polysaccharide efflux1e-1273.9
NC_015976:1064888:107214710721471072944798Sphingobium sp. SYK-6, complete genomeputative capsule polysaccharide export inner-membrane protein3e-1272
NC_010505:1264758:126880912688091269603795Methylobacterium radiotolerans JCM 2831, complete genomeABC-2 type transporter2e-1066.2
NC_012586:922095:926806926806927246441Rhizobium sp. NGR234 plasmid pNGR234b, complete sequencepolysialic acid transport protein kpsM5e-1065.1
NC_017033:3013654:303565830356583036458801Frateuria aurantia DSM 6220 chromosome, complete genomeABC-type polysaccharide/polyol phosphate export systems permease1e-0963.9
NC_011666:3001513:301303930130393013845807Methylocella silvestris BL2, complete genomeABC-2 type transporter2e-0963.2
NC_007513:632884:640016640016640849834Synechococcus sp. CC9902, complete genomepossible ABC transporter involved in polysaccharide efflux3e-0962.4
NC_007005:1036243:104203210420321042826795Pseudomonas syringae pv. syringae B728a, complete genomeABC-23e-0962
NC_007510:759905:778758778758779519762Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein5e-0961.6
NC_008785:516500:526719526719527378660Burkholderia mallei SAVP1 chromosome II, complete sequencecapsular polysaccharide export inner-membrane protein1e-0860.5
NC_009080:2123987:214742221474222148081660Burkholderia mallei NCTC 10247 chromosome II, complete sequencecapsular polysaccharide export inner-membrane protein1e-0860.5
NC_019977:1245894:127416712741671275063897Methanomethylovorans hollandica DSM 15978, complete genomeABC-type polysaccharide/polyol phosphate export systems, permease component1e-0860.1
NC_011000:3514338:354816735481673548961795Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative capsular polysaccharide export protein ABC transporter membrane protein2e-0860.1
NC_012913:626449:632965632965633753789Aggregatibacter aphrophilus NJ8700, complete genomeABC transporter integral membrane subunit2e-0859.7
NC_007516:1847745:185936318593631860205843Synechococcus sp. CC9605, complete genomepossible ABC transporter involved in polysaccharide efflux2e-0859.7
NC_013416:1621469:163606116360611636846786Aggregatibacter actinomycetemcomitans D11S-1, complete genomeABC transporter integral membrane subunit2e-0859.7
NC_010725:2589014:259395025939502594744795Methylobacterium populi BJ001, complete genomeABC-2 type transporter4e-0858.9
NC_019973:5069499:507443950744395075224786Mesorhizobium australicum WSM2073, complete genomeABC-type polysaccharide/polyol phosphate export system, permease component6e-0858.2
NC_011365:738321:752164752164752952789Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeABC-2 type transporter7e-0857.8
NC_015675:2697131:272058527205852721370786Mesorhizobium opportunistum WSM2075 chromosome, complete genomeABC transporter9e-0857.4
NC_008639:2702662:272077727207772721559783Chlorobium phaeobacteroides DSM 266, complete genomeABC-2 type transporter1e-0757.4
NC_010337:803748:834304834304835092789Heliobacterium modesticaldum Ice1, complete genomeabc-2 transporter, putative2e-0756.6
NC_015578:1633393:165394816539481654724777Treponema primitia ZAS-2 chromosome, complete genomeO-antigen export system permease RfbA2e-0756.2
NC_015660:296488:310816310816311592777Geobacillus thermoglucosidasius C56-YS93 chromosome, completeABC-2 type transporter3e-0755.5
NC_007645:2294553:230016623001662300987822Hahella chejuensis KCTC 2396, complete genomeABC-type polysaccharide/polyol phosphate export systems, permease component4e-0755.5
NC_020211:1704500:174340817434081744202795Serratia marcescens WW4, complete genomelipopolysaccharide ABC transporter permease5e-0755.1
NC_016832:4482437:448647544864754487269795Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Vi polysaccharide export inner-membrane protein vexB6e-0754.7
NC_004631:4494000:449820744982074499001795Salmonella enterica subsp. enterica serovar Typhi Ty2, completeVi polysaccharide export inner-membrane protein6e-0754.7
NC_003198:4513900:451462145146214515415795Salmonella enterica subsp. enterica serovar Typhi str. CT18,Vi polysaccharide export inner-membrane protein (ABC-2 type transporter)6e-0754.7
NC_014836:223013:252019252019252810792Desulfurispirillum indicum S5 chromosome, complete genomeABC-2 type transporter9e-0754.3
NC_007347:767455:775211775211776032822Ralstonia eutropha JMP134 chromosome 1, complete sequenceABC-27e-0754.3
NC_008313:3112440:313726331372633138060798Ralstonia eutropha H16 chromosome 1, complete sequenceABC-type transporter, permease component7e-0754.3
NC_012125:4559990:456402845640284564822795Salmonella enterica subsp. enterica serovar Paratyphi C strainVi polysaccharide export inner-membrane protein7e-0754.3
NC_013665:1922000:194094819409481941820873Methanocella paludicola SANAE, complete genomeABC transporter permease protein1e-0653.9
NC_010622:2576110:259892725989272599784858Burkholderia phymatum STM815 chromosome 1, complete sequenceABC-2 type transporter1e-0653.5
NC_010551:846953:852119852119852913795Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceABC-2 type transporter2e-0653.1
NC_003901:775500:787432787432788280849Methanosarcina mazei Go1, complete genomepolysaccharide ABC transporter permease3e-0652.4
NC_009712:1822375:184170418417041842552849Candidatus Methanoregula boonei 6A8, complete genomeABC-2 type transporter3e-0652.4
CU928160:2155947:215594721559472156741795Escherichia coli IAI1 chromosome, complete genomeIntegral membrane component of ABC-transporter3e-0652.4
NC_011741:2155947:215594721559472156741795Escherichia coli IAI1 chromosome, complete genomeIntegral membrane component of ABC-transporter3e-0652.4
NC_010125:2483122:249864324986432499443801Gluconacetobacter diazotrophicus PAl 5, complete genomeputative capsule polysaccharide export inner-membrane protein ctrC3e-0652.4
NC_016027:2047954:209802720980272098839813Gluconacetobacter xylinus NBRC 3288, complete genomecapsular polysaccharide ABC transporter transmembrane protein3e-0652.4
NC_013960:2662458:266629026662902667138849Nitrosococcus halophilus Nc4 chromosome, complete genomeABC-2 type transporter3e-0652.4
NC_015589:3711821:373367937336793734473795Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeABC-2 type transporter4e-0652
NC_020181:360500:389599389599390393795Enterobacter aerogenes EA1509E, complete genomeO-antigen export system permease protein RfbD5e-0651.6
NC_008060:306170:325314325314326096783Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceABC-2 type transporter5e-0651.6
NC_010508:809974:830758830758831558801Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceABC-2 type transporter8e-0651.2
NC_015733:1555476:156606815660681566862795Pseudomonas putida S16 chromosome, complete genomelipopolysaccharide ABC export system permease8e-0650.8
NC_016513:1958500:197405919740591974784726Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeABC transporter9e-0650.8
NC_011769:3401353:341787134178713418695825Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeABC-2 type transporter1e-0550.8
NC_015458:3328905:333856633385663339363798Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein1e-0550.8