Pre_GI Gene

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Host: NC_011989 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011989:1604939 Agrobacterium vitis S4 chromosome 1, complete sequence

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16049391605175237BolAYrbA family proteinQuickGO ontologyBLASTP
160521416074512238phosphoribosylformylglycinamidine synthase IIQuickGO ontologyBLASTP
16077991608410612molecular chaperone DnaJ familyQuickGO ontologyBLASTP
16089931609625633transcriptional regulator proteinQuickGO ontologyBLASTP
16096471610378732lipoate-protein ligase BQuickGO ontologyBLASTP
16112911612052762polysialic acid transport proteinQuickGO ontologyBLASTP
161207716131081032phage-related integraseQuickGO ontologyBLASTP
161415516151621008hypothetical protein
16155761616190615Phage repressor proteinQuickGO ontologyBLASTP
16167451617242498hypothetical protein
16175611618121561hypothetical protein
16181181618411294hypothetical protein
161840816196911284hypothetical protein
16196781620334657Transcription antiterminator proteinQuickGO ontologyBLASTP
16210031621470468Phage terminaseQuickGO ontologyBLASTP
162145416232681815Phage terminaseQuickGO ontologyBLASTP
162328116245881308hypothetical proteinBLASTP
16245631625159597prohead proteaseQuickGO ontologyBLASTP