Pre_GI: BLASTP Hits

Some Help

Query: NC_008148:258292:259984 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 259984, End: 261150, Length: 1167

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015690:8019859:8025458802545880266541197Paenibacillus mucilaginosus KNP414 chromosome, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit2e-130465
NC_014829:443500:4477714477714488981128Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit6e-106384
NC_017208:256163:3078223078223089731152Bacillus thuringiensis serovar chinensis CT-43 chromosome, completephosphoribosylaminoimidazole4e-101368
NC_010556:462500:4749684749684760711104Exiguobacterium sibiricum 255-15, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit1e-97357
NC_011567:238249:2525402525402536881149Anoxybacillus flavithermus WK1, complete genomePhosphoribosylaminoimidazole carboxylase (NCAIR synthetase)2e-96353
NC_014171:261952:3182513182513193151065Bacillus thuringiensis BMB171 chromosome, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit5e-94344
NC_016023:1725294:1738061173806117392211161Bacillus coagulans 36D1 chromosome, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit1e-93343
NC_018665:422451:4347274347274358301104Exiguobacterium antarcticum B7 chromosome, complete genomeN5-carboxyaminoimidazole ribonucleotide synthase2e-90332
NC_012673:2152639:2171335217133521724291095Exiguobacterium sp. AT1b, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit2e-88326
NC_004193:783958:7875257875257886581134Oceanobacillus iheyensis HTE831, complete genomephosphoribosylaminoimidazole carboxylase II4e-82305
NC_018704:433402:4360854360854372061122Amphibacillus xylanus NBRC 15112, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit4e-82305
NC_015391:2488450:2506125250612525072611137Carnobacterium sp. 17-4 chromosome, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit6e-79294
NC_018720:1510084:1513178151317815143441167Bifidobacterium asteroides PRL2011 chromosome, complete genomepurK Phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit3e-76285
NC_003485:35971:4909449094502031110Streptococcus pyogenes MGAS8232, complete genomephosphoribosylaminoimidazole carboxylase8e-76284
NC_008024:35948:4906949069502021134Streptococcus pyogenes MGAS10750, complete genomePhosphoribosylaminoimidazole carboxylase NCAIR mutase subunit3e-75282
NC_008023:35663:4878448784498931110Streptococcus pyogenes MGAS2096, complete genomePhosphoribosylaminoimidazole carboxylase NCAIR mutase subunit7e-75281
NC_008021:35661:4880948809499181110Streptococcus pyogenes MGAS9429, complete genomephosphoribosylaminoimidazole carboxylase NCAIR mutase subunit7e-75281
NC_007296:35661:4878248782498911110Streptococcus pyogenes MGAS6180, complete genomephosphoribosylaminoimidazole carboxylase2e-74280
NC_004368:53307:5989459894609821089Streptococcus agalactiae NEM316, complete genomephosphoribosylaminoimidazole carboxylase4e-74278
NC_008022:35983:4917849178502871110Streptococcus pyogenes MGAS10270, complete genomePhosphoribosylaminoimidazole carboxylase NCAIR mutase subunit6e-74278
NC_012925:29353:4168741687427661080Streptococcus suis P1/7, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit2e-73276
NC_012924:29353:4168741687427661080Streptococcus suis SC84, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit2e-73276
NC_012926:30351:4168541685427641080Streptococcus suis BM407 chromosome, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit2e-73276
NC_009633:947695:9520859520859532601176Alkaliphilus metalliredigens QYMF chromosome, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit3e-71269
NC_014498:99015:1103031103031113941092Streptococcus pneumoniae 670-6B chromosome, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit5e-71268
NC_010380:124655:1359431359431370341092Streptococcus pneumoniae Hungary19A-6, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit3e-70265
NC_009667:1203861:1229969122996912310691101Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencephosphoribosylaminoimidazole carboxylase ATPase subunit3e-70265
NC_020164:1784223:1796774179677417979011128Staphylococcus warneri SG1, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit2e-69263
NC_007168:1923723:1938251193825119393871137Staphylococcus haemolyticus JCSC1435, complete genomephosphoribosylaminoimidazole carboxylase carbon dioxide-fixation chain PurK3e-69262
NC_009443:29349:4168341683427561074Streptococcus suis 98HAH33, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit5e-68258
NC_010718:464405:4781224781224792851164Natranaerobius thermophilus JW/NM-WN-LF, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit1e-67257
NC_002976:638799:6446746446746458011128Staphylococcus epidermidis RP62A, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit3e-67256
NC_004461:746284:7521587521587532851128Staphylococcus epidermidis ATCC 12228, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit4e-67255
NC_008783:177161:2095162095162106671152Bartonella bacilliformis KC583, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit4e-66252
NC_015222:1492500:1493104149310414942371134Nitrosomonas sp. AL212 chromosome, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit1e-64247
NC_003919:3113343:3136762313676231379071146Xanthomonas axonopodis pv. citri str. 306, complete genomephosphoribosylaminoimidazole carboxylase9e-63241
NC_009718:1183816:1191599119159911927771179Fervidobacterium nodosum Rt17-B1, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit1e-62240
NC_017513:997716:1009024100902410101601137Neisseria meningitidis G2136 chromosome, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit2e-62239
NC_007705:3429493:3451745345174534528901146Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit2e-62239
NC_012985:1:4021640216412801065Candidatus Liberibacter asiaticus str. psy62, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit3e-61236
NC_007626:2354260:2397158239715823982671110Magnetospirillum magneticum AMB-1, complete genomePhosphoribosylaminoimidazole carboxylase1e-60234
NC_007508:3183631:3217825321782532189701146Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomephosphoribosylaminoimidazole carboxylase2e-60233
NC_014932:1314881:1331083133108313321981116Bartonella clarridgeiae 73, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit (AIR carboxylase) (AIRC)2e-59230
NC_015732:2762424:2773962277396227751611200Spirochaeta caldaria DSM 7334 chromosome, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit6e-59228
NC_006396:1253873:1274647127464712757921146Haloarcula marismortui ATCC 43049 chromosome I, complete sequencephosphoribosylaminoimidazole carboxylase ATP binding subunit5e-58225
NC_007963:3225306:3228734322873432298281095Chromohalobacter salexigens DSM 3043, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit4e-58225
NC_017271:2935643:2993647299364729947891143Xanthomonas campestris pv. raphani 756C chromosome, completephosphoribosylaminoimidazole carboxylase ATPase subunit9e-58224
NC_007086:1936505:1936505193650519376471143Xanthomonas campestris pv. campestris str. 8004, complete genomephosphoribosylaminoimidazole carboxylase2e-57223
NC_011999:728353:7404097404097415271119Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein3e-57222
NC_006513:38818:5678256782579421161Azoarcus sp. EbN1, complete genomephosphoribosylaminoimidazole carboxylase3e-57222
NC_010688:1908012:1908012190801219091541143Xanthomonas campestris pv. campestris, complete genomePhosphoribosylaminoimidazole carboxylase ATPase subunit6e-57221
NC_019907:920797:9446179446179456871071Liberibacter crescens BT-1 chromosome, complete genomePhosphoribosylaminoimidazole carboxylase ATPase subunit2e-55216
NC_002488:2546495:2546495254649525476761182Xylella fastidiosa 9a5c, complete genomephosphoribosylaminoimidazole carboxylase4e-54212
NC_009439:101174:1177031177031187881086Pseudomonas mendocina ymp, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit2e-53210
NC_020299:127480:1431981431981443851188Candidatus Kinetoplastibacterium oncopeltii TCC290E, complete5-(carboxyamino)imidazole ribonucleotide synthase2e-53210
NC_014633:265086:2788602788602799871128Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence5-(carboxyamino)imidazole ribonucleotide synthase2e-53209
NC_014958:3346500:3364144336414433652561113Deinococcus maricopensis DSM 21211 chromosome, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit3e-53209
NC_019815:761480:7733967733967745891194Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei5-(carboxyamino)imidazole ribonucleotide synthase8e-50197
NC_014541:2325780:2329312232931223304001089Ferrimonas balearica DSM 9799 chromosome, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit2e-48193
NC_015151:1872280:1897645189764518987691125Vulcanisaeta moutnovskia 768-28 chromosome, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit2e-46187
NC_009338:5052000:5056044505604450573061263Mycobacterium gilvum PYR-GCK chromosome, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit5e-46185
NC_012526:300126:3241183241183252511134Deinococcus deserti VCD115, complete genomeputative Phosphoribosylaminoimidazole carboxylase ATPase subunit, (AIR carboxylase), (AIRC)8e-46184
NC_014814:4235477:4235477423547742366401164Mycobacterium sp. Spyr1 chromosome, complete genomephosphoribosylaminoimidazole carboxylase4e-44179
NC_007929:1397989:1405425140542514065641140Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhosphoribosylaminoimidazole carboxylase NCAIR mutase subunit5e-44178
NC_013131:971937:9747079747079758431137Catenulispora acidiphila DSM 44928, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit6e-43175
NC_014655:1038352:1043555104355510446821128Leadbetterella byssophila DSM 17132 chromosome, complete genome5-(carboxyamino)imidazole ribonucleotide synthase6e-43175
NC_015312:5579078:5599431559943156006361206Pseudonocardia dioxanivorans CB1190 chromosome, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit2e-41170
NC_016516:1799521:1799521179952118006931173Propionibacterium acnes TypeIA2 P.acn33 chromosome, completephosphoribosylaminoimidazole carboxylase ATPase subunit3e-41169
NC_009092:1441813:1446672144667214477691098Shewanella loihica PV-4, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit1e-40167
NC_014910:4316706:4319220431922043203891170Alicycliphilus denitrificans BC chromosome, complete genomephosphoribosylaminoimidazole carboxylase, atpase subunit8e-40164
NC_005071:704882:7258347258347270331200Prochlorococcus marinus str. MIT 9313, complete genomephosphoribosylaminoimidazole carboxylase3e-38159
NC_012913:772641:7944467944467955341089Aggregatibacter aphrophilus NJ8700, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit8e-38158
NC_015518:761380:8222908222908233811092Acidianus hospitalis W1 chromosome, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit1e-37157
NC_007513:987969:1016752101675210179511200Synechococcus sp. CC9902, complete genomePhosphoribosylaminoimidazole carboxylase, ATPase subunit3e-35149
NC_012214:2805297:2828161282816128292281068Erwinia pyrifoliae Ep1/96, complete genomePhosphoribosylaminoimidazole carboxylase ATPase subunit2e-34147
NC_007335:117572:1219141219141230591146Prochlorococcus marinus str. NATL2A, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit3e-34146
NC_008819:679320:6846506846506857951146Prochlorococcus marinus str. NATL1A, complete genomephosphoribosylaminoimidazole carboxylase1e-33144
NC_009832:1280938:1279874127987412809411068Serratia proteamaculans 568, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit2e-33143
NC_014306:1286248:1285181128518112862511071Erwinia billingiae Eb661, complete genomePhosphoribosylaminoimidazole carboxylase ATPase subunit7e-33141
NC_013124:1544821:1545903154590315469941092Acidimicrobium ferrooxidans DSM 10331, complete genomePhosphoribosylaminoimidazole carboxylase9e-33141
NC_010465:3431500:3450659345065934517231065Yersinia pseudotuberculosis YPIII, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit9e-33141
NC_015663:2807574:2808761280876128098281068Enterobacter aerogenes KCTC 2190 chromosome, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit2e-32140
NC_020260:2725201:2749892274989227509591068Cronobacter sakazakii Sp291, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit6e-32138
NC_016816:3373950:3392889339288933939531065Pantoea ananatis LMG 5342, complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit1e-31137
NC_015276:855150:8551508551508562171068Marinomonas mediterranea MMB-1 chromosome, complete genomephosphoribosylaminoimidazole carboxylase, ATPase subunit3e-31136
NC_007712:1182518:1182518118251811835881071Sodalis glossinidius str. 'morsitans', complete genomephosphoribosylaminoimidazole carboxylase ATPase subunit1e-30134
NC_011059:2478075:2505511250551125066921182Prosthecochloris aestuarii DSM 271, complete genomephosphoribosylglycinamide formyltransferase 25e-25115
NC_014537:542515:5540315540315552301200Vulcanisaeta distributa DSM 14429 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein3e-24113
NC_013407:203539:2223252223252234941170Methanocaldococcus vulcanius M7, complete genomephosphoribosylglycinamide formyltransferase 22e-24113
NC_014222:1677610:1699438169943817006251188Methanococcus voltae A3 chromosome, complete genomephosphoribosylglycinamide formyltransferase 25e-24112
NC_010278:1235934:1247008124700812481891182Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,phosphoribosylglycinamide formyltransferase 26e-24112
NC_000868:1607552:1608905160890516101941290Pyrococcus abyssi GE5, complete genome5'-phosphoribosylglycinamide transformylase8e-24111
NC_008245:1845525:1853913185391318550731161Francisella tularensis subsp. tularensis FSC 198, complete genomephosphoribosylglycinamide formyltransferase 26e-21102
NC_016937:1850382:1853983185398318551431161Francisella tularensis subsp. tularensis TI0902 chromosome,phosphoribosylglycinamide formyltransferase 26e-21102
NC_009257:5615:1753217532186921161Francisella tularensis subsp. tularensis WY96-3418 chromosome,phosphoribosylglycinamide formyltransferase 25e-21102
NC_009464:1531847:1548593154859315498731281Uncultured methanogenic archaeon RC-I, complete genomephosphoribosylglycinamide formyltransferase3e-21102
NC_009749:77583:8541685416865761161Francisella tularensis subsp. holarctica FTA, complete genomephosphoribosylglycinamide formyltransferase 22e-20100
NC_008369:82515:8535885358865181161Francisella tularensis subsp. holarctica OSU18, complete genomephosphoribosylglycinamide formyltransferase2e-20100
NC_017192:159047:1738391738391750081170Arcobacter sp. L, complete genomephosphoribosylglycinamide formyltransferase2e-1997.1
NC_016047:345491:3577353577353588891155Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completephosphoribosylglycinamide formyltransferase 22e-1997.1
NC_013959:1428381:1446411144641114476161206Sideroxydans lithotrophicus ES-1 chromosome, complete genomephosphoribosylglycinamide formyltransferase 22e-1996.7
NC_006958:2911711:2916315291631529175411227Corynebacterium glutamicum ATCC 13032, complete genome5'-phosphoribosylglycinamide transformylase4e-1995.9
NC_003450:2938404:2943010294301029442361227Corynebacterium glutamicum ATCC 13032, complete genomephosphoribosylglycinamide formyltransferase 24e-1995.9
NC_012912:2553391:2568157256815725693381182Dickeya zeae Ech1591, complete genomephosphoribosylglycinamide formyltransferase 22e-1893.6
NC_014639:3850000:3870849387084938720031155Bacillus atrophaeus 1942 chromosome, complete genomephosphoribosylglycinamide formyltransferase 25e-1892.4
CP002207:3850000:3870849387084938720031155Bacillus atrophaeus 1942, complete genomephosphoribosylglycinamide formyltransferase 25e-1892.4
NC_012590:2501593:2502664250266425040101347Corynebacterium aurimucosum ATCC 700975, complete genomephosphoribosylglycinamide formyltransferase7e-1892
NC_007181:163640:1764281764281776241197Sulfolobus acidocaldarius DSM 639, complete genome5'-phosphoribosylglycinamide transformylase2e-1790.5
NC_010159:1668795:1687096168709616882771182Yersinia pestis Angola, complete genomephosphoribosylglycinamide formyltransferase 25e-1685.5
NC_013421:2306000:2309722230972223109001179Pectobacterium wasabiae WPP163, complete genomephosphoribosylglycinamide formyltransferase 21e-1584.3
NC_008258:1873805:1895374189537418965521179Shigella flexneri 5 str. 8401, complete genomephosphoribosylglycinamide formyltransferase 24e-1479.3
NC_016822:1339058:1359088135908813602661179Shigella sonnei 53G, complete genomephosphoribosylglycinamide formyltransferase 26e-1479
NC_007384:1355060:1376240137624013774181179Shigella sonnei Ss046, complete genomephosphoribosylglycinamide formyltransferase 26e-1479
NC_014471:217279:2296232296232308371215Ignisphaera aggregans DSM 17230 chromosome, complete genomePhosphoribosylaminoimidazole carboxylase6e-1478.6
NC_017317:2149794:2152844215284421538991056Corynebacterium ulcerans 809 chromosome, complete genomephosphoribosylglycinamide formyltransferase 24e-1272.8
NC_015683:2249949:2253000225300022540551056Corynebacterium ulcerans BR-AD22 chromosome, complete genomephosphoribosylglycinamide formyltransferase 21e-1170.9
NC_010278:1235934:124368212436821244068387Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,phosphoribosylglycinamide formyltransferase 21e-0551.6