Pre_GI: BLASTP Hits

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Query: NC_008044:857759:878016 Silicibacter sp. TM1040, complete genome

Start: 878016, End: 879683, Length: 1668

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009050:604950:6093846093846110361653Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceAmidohydrolase 35e-122438
NC_007494:27084:3151831518331701653Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencePutative metal-dependent hydrolase5e-122438
NC_011958:53426:5637756377580291653Rhodobacter sphaeroides KD131 chromosome 2, complete genomeAmidohydrolase 32e-121436
NC_011001:2085986:2146425214642521480501626Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative amidohydrolase2e-58227
NC_011831:1610346:1631230163123016328281599Chloroflexus aggregans DSM 9485, complete genomeAmidohydrolase 32e-53210
NC_016109:6816000:6837766683776668394061641Kitasatospora setae KM-6054, complete genomeputative peptidase M38 family protein7e-46185
NC_014924:2399524:2424848242484824265721725Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeAmidohydrolase 36e-45182
NC_018080:2732962:2750916275091627526581743Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-41171
NC_010338:4481356:4481356448135644829901635Caulobacter sp. K31, complete genomeAmidohydrolase 35e-41169
NC_009922:944538:9445389445389461421605Alkaliphilus oremlandii OhILAs, complete genomeAmidohydrolase 31e-38161
NC_004129:5781413:5782703578270357844481746Pseudomonas fluorescens Pf-5, complete genomeamidohydrolase family protein1e-37158
NC_009092:1047500:1057371105737110591191749Shewanella loihica PV-4, complete genomeAmidohydrolase 32e-36154
NC_015723:2550000:2570566257056625722421677Cupriavidus necator N-1 chromosome 2, complete sequenceamidohydrolase4e-36153
NC_014364:2904443:2913059291305929146661608Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeAmidohydrolase 38e-36152
NC_007974:1135863:1137708113770811393901683Ralstonia metallidurans CH34 chromosome 2, complete sequenceAmidohydrolase 32e-35150
NC_017986:4790482:4816106481610648177731668Pseudomonas putida ND6 chromosome, complete genomeamidohydrolase 37e-35149
NC_007333:2093167:2093167209316720947861620Thermobifida fusca YX, complete genomehypothetical protein5e-33142
NC_013204:34782:4104841048426311584Eggerthella lenta DSM 2243, complete genomeAmidohydrolase 33e-31137
NC_011772:4565418:4569412456941245709801569Bacillus cereus G9842, complete genomehypothetical protein3e-31137
NC_010184:3213347:3215590321559032172091620Bacillus weihenstephanensis KBAB4, complete genomeAmidohydrolase 32e-31137
NC_011725:4600000:4604131460413146056991569Bacillus cereus B4264 chromosome, complete genomehypothetical protein7e-30132
NC_017249:2109843:2130099213009921317841686Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-29130
NC_015161:792955:7929557929557944691515Deinococcus proteolyticus MRP chromosome, complete genomeAmidohydrolase 33e-29130
NC_020156:3050423:3064525306452530662341710Nonlabens dokdonensis DSW-6, complete genomeamidohydrolase-like protein1e-28128
NC_013524:171524:1822641822641839761713Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeAmidohydrolase 32e-28127
NC_012522:3867167:3889481388948138911871707Rhodococcus opacus B4, complete genomeputative hydrolase3e-28127
NC_012526:2317862:2322070232207023235571488Deinococcus deserti VCD115, complete genomeputative amidohydrolase2e-27124
NC_020291:5778999:5783451578345157852021752Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative TIM-barrel fold metal-dependent hydrolase4e-27123
NC_014624:1349950:1354311135431113560351725Eubacterium limosum KIST612 chromosome, complete genomeexoenzyme regulatory protein9e-27122
NC_015977:2631789:2654238265423826558031566Roseburia hominis A2-183 chromosome, complete genomeamidohydrolase2e-25117
NC_015510:1978539:1999705199970520012611557Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeAmidohydrolase 34e-25116
NC_021184:2936244:2969732296973229714321701Desulfotomaculum gibsoniae DSM 7213, complete genomeputative TIM-barrel fold metal-dependent hydrolase1e-24114
NC_008942:1706191:1726815172681517284161602Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-23111
NC_011769:787496:7874967874967891181623Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeAmidohydrolase 32e-22107
NC_013093:1213908:1218379121837912199561578Actinosynnema mirum DSM 43827, complete genomeAmidohydrolase 34e-22106
NC_009656:2801885:2840830284083028425721743Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-22106
NC_015434:3507059:3515997351599735174301434Verrucosispora maris AB-18-032 chromosome, complete genomeamidohydrolase 34e-21103
NC_019908:436000:4421614421614437471587Brachyspira pilosicoli P43/6/78 chromosome, complete genomeamidohydrolase 37e-21102
NC_014330:195447:2145912145912161771587Brachyspira pilosicoli 95/1000 chromosome, complete genomeamidohydrolase 36e-21102
NC_008278:4023918:4041168404116840427691602Frankia alni ACN14a, complete genomeconserved hypothetical protein; putative metallo-dependent hydrolase domain6e-21102
NC_018607:1505908:1545214154521415468001587Brachyspira pilosicoli B2904 chromosome, complete genomeamidohydrolase1e-20101
NC_010505:5077162:5079761507976150813981638Methylobacterium radiotolerans JCM 2831, complete genomeAmidohydrolase 33e-1997.1
NC_012225:212727:2145972145972161441548Brachyspira hyodysenteriae WA1, complete genomeamidohydrolase 34e-1996.7
NC_007777:2638580:2650987265098726526331647Frankia sp. CcI3, complete genomeAmidohydrolase 36e-1892.8
NC_015733:2658337:2673459267345926751171659Pseudomonas putida S16 chromosome, complete genomeputative periplasmic protein1e-1792
NC_015389:809474:8330638330638346341572Coriobacterium glomerans PW2 chromosome, complete genomeAmidohydrolase 32e-1687.4
NC_014012:1097938:1111222111122211129341713Shewanella violacea DSS12, complete genomemetal-dependent hydrolase, putative3e-1687
NC_007348:2558500:2576872257687225785151644Ralstonia eutropha JMP134 chromosome 2, complete sequenceAmidohydrolase:Amidohydrolase-like5e-1686.3
NC_017249:2109843:2133816213381621355071692Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-1686.3
NC_017095:2058921:2071003207100320723161314Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeputative TIM-barrel fold metal-dependent hydrolase3e-1583.6
NC_015723:280368:2988722988723008181947Cupriavidus necator N-1 chromosome 2, complete sequenceamidohydrolase1e-1481.6
NC_009663:2531876:2547976254797625498561881Sulfurovum sp. NBC37-1, complete genomemetal-dependent hydrolase3e-1480.9
NC_015957:5310000:5325690532569053273091620Streptomyces violaceusniger Tu 4113 chromosome, complete genomeamidohydrolase 35e-1479.7
NC_009953:2727669:2738129273812927396941566Salinispora arenicola CNS-205 chromosome, complete genomeamidohydrolase 36e-1479.3
NC_009380:2548878:2558288255828825597841497Salinispora tropica CNB-440 chromosome, complete genomeamidohydrolase 35e-1376.6
NC_002928:507749:5117275117275133761650Bordetella parapertussis 12822, complete genomehypothetical protein6e-1376.3
NC_009921:4948500:4960385496038549620761692Frankia sp. EAN1pec, complete genomeAmidohydrolase 36e-1376.3
NC_017186:5184000:5202878520287852044731596Amycolatopsis mediterranei S699 chromosome, complete genomeamidohydrolase1e-1275.1
NC_014318:5183975:5202844520284452044391596Amycolatopsis mediterranei U32 chromosome, complete genomeamidohydrolase1e-1275.1
NC_002927:506183:5101635101635118121650Bordetella bronchiseptica RB50, complete genomehypothetical protein7e-1272.8
NC_015138:2110149:2127643212764321295111869Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeAmidohydrolase 34e-1067
NC_014931:1044313:1066641106664110686231983Variovorax paradoxus EPS chromosome, complete genomeAmidohydrolase 34e-1067
NC_015566:3269469:3289042328904232909191878Serratia sp. AS12 chromosome, complete genomeAmidohydrolase 31e-0862
NC_015593:463477:4698474698474719132067Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeamidohydrolase2e-0861.6
NC_014973:3290545:3316892331689233187031812Geobacter sp. M18 chromosome, complete genomeAmidohydrolase 34e-0860.1
NC_014220:1269870:1285273128527312863791107Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeAmidohydrolase 34e-0860.1
UCMB5137:2418403:2423962242396224257941833Bacillus atrophaeus UCMB-5137metal-dependent hydrolase5e-0860.1
NC_014639:2452286:2458654245865424604861833Bacillus atrophaeus 1942 chromosome, complete genomemetal-dependent hydrolase7e-0859.3
CP002207:2452286:2458654245865424604861833Bacillus atrophaeus 1942, complete genomemetal-dependent hydrolase7e-0859.3
NC_015382:172213:1722131722131740901878Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequenceAmidohydrolase 31e-0758.5
NC_005085:2869159:2886315288631528882311917Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein4e-0757
NC_018515:4196409:4208204420820442094601257Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeimidazolonepropionase1e-0655.5
NC_008781:1426285:1426285142628514281651881Polaromonas naphthalenivorans CJ2, complete genomeAmidohydrolase 31e-0655.1
NC_020126:7686076:7702658770265877043221665Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-0654.7
NC_016804:2254979:2273930227393022755341605Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein6e-0653.1
NC_016768:2101751:2102283210228321038871605Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein6e-0653.1
NC_012943:2103662:2104194210419421057981605Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein6e-0653.1
NC_009565:2306574:2325525232552523271291605Mycobacterium tuberculosis F11, complete genomehypothetical protein6e-0653.1
NC_013174:1366786:1382767138276713843921626Jonesia denitrificans DSM 20603, complete genomeAmidohydrolase 38e-0652.4