Pre_GI: BLASTP Hits

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Query: NC_006177:3457637:3473401 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 3473401, End: 3473670, Length: 270

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014831:65408:836688366883919252Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, AbrB family6e-38155
NC_016884:157894:179380179380179628249Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeAbrB family transcriptional regulator1e-32138
NC_015913:35837:585095850958751243Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeAbrB family transcriptional regulator7e-28122
NC_016012:16134:613746137461616243Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeAbrB family transcriptional regulator8e-28122
NC_019978:2293327:230980223098022310059258Halobacteroides halobius DSM 5150, complete genomelooped-hinge helix DNA binding domain, AbrB family1e-27121
NC_012563:2597934:260159226015922601831240Clostridium botulinum A2 str. Kyoto, complete genometranscriptional regulator, AbrB family9e-27118
NC_015437:572788:591115591115591369255Selenomonas sputigena ATCC 35185 chromosome, complete genometranscriptional regulator, AbrB family7e-26115
NC_009495:2479465:251200425120042512243240Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeSpoVT/AbrB family regulatory protein7e-25112
NC_011898:3658372:366576236657623666004243Clostridium cellulolyticum H10, complete genometranscriptional regulator, AbrB family2e-21100
NC_014393:4323368:433762243376224337870249Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, AbrB family3e-21100
NC_016791:1620858:163295316329531633195243Clostridium sp. BNL1100 chromosome, complete genomeAbrB family DNA-binding protein7e-2199.4
NC_010674:2011403:202279820227982023052255Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein2e-2097.8
NC_004193:35698:448064480645081276Oceanobacillus iheyensis HTE831, complete genometranscriptional pleiotropic regulator of transition state genes1e-1892
NC_010381:92000:100641100641100967327Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequencetransition state regulatory protein1e-1788.2
NC_014219:2253023:226899422689942269278285Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, AbrB family1e-1788.2
NC_016935:1636278:164911716491171649395279Paenibacillus mucilaginosus 3016 chromosome, complete genomeAbrB family transcriptional regulator2e-1788.2
NC_016935:6464201:648721264872126487505294Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-1786.7
NC_017167:1648913:165478916547891655040252Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1AbrB family transcriptional regulator6e-1786.3
NC_017167:2259413:226316022631602263411252Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1AbrB family transcriptional regulator2e-1684.3
NC_013205:1187812:124280912428091243057249Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, AbrB family8e-1682.4
NC_004722:1804788:183129818312981831579282Bacillus cereus ATCC 14579, complete genomeTranscription state regulatory protein abrB7e-1682.4
NC_017208:1831918:186233218623321862613282Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscription state transcriptional regulator AbrB6e-1579.7
NC_014622:5315500:532113953211395321588450Paenibacillus polymyxa SC2 chromosome, complete genometransition state transcriptional regulatory protein abrb1e-1478.6
NC_014483:4957315:496281649628164963265450Paenibacillus polymyxa E681 chromosome, complete genomeRegulators of stationary/sporulation gene expression8e-1475.9
NC_016641:1085862:108996510899651090414450Paenibacillus terrae HPL-003 chromosome, complete genomeregulators of stationary/sporulation gene expression2e-1374.3
NC_014483:39729:469584695847500543Paenibacillus polymyxa E681 chromosome, complete genomeStage V sporulation protein T3e-1270.9
NC_016641:1639356:164550816455081646050543Paenibacillus terrae HPL-003 chromosome, complete genomestage V sporulation protein T3e-1270.9
NC_020291:117983:122958122958123509552Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomestage V sporulation protein T2e-1168.2
NC_019978:91483:108457108457109011555Halobacteroides halobius DSM 5150, complete genomestage V sporulation protein T2e-1167.8
NC_014152:191200:191200191200191763564Thermincola sp. JR, complete genometranscriptional regulator, AbrB family6e-1166.2
NC_011899:2286884:230691623069162307473558Halothermothrix orenii H 168, complete genometranscriptional regulator, AbrB family8e-1165.9
NC_010516:3845942:385167338516733852224552Clostridium botulinum B1 str. Okra, complete genomestage V sporulation protein T9e-1165.5
NC_017297:3878540:388166838816683882219552Clostridium botulinum F str. 230613 chromosome, complete genomestage V sporulation protein T1e-1065.5
NC_009633:168266:180682180682181233552Alkaliphilus metalliredigens QYMF chromosome, complete genomeAbrB family transcriptional regulator1e-1065.5
NC_009698:3647955:365376536537653654316552Clostridium botulinum A str. Hall chromosome, complete genomestage V sporulation protein T1e-1065.5
NC_009697:3753527:375665537566553757206552Clostridium botulinum A str. ATCC 19397 chromosome, completestage V sporulation protein T1e-1065.5
NC_009922:2850320:286475428647542865302549Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, AbrB family1e-1065.1
NC_016641:2894899:290351429035142903960447Paenibacillus terrae HPL-003 chromosome, complete genometransition state transcriptional regulatory protein abrb1e-0858.5
NC_016641:1369424:138453713845371384785249Paenibacillus terrae HPL-003 chromosome, complete genomespovt/abrb9e-0855.8
NC_016641:2394628:240233524023352402616282Paenibacillus terrae HPL-003 chromosome, complete genomeregulators of stationary/sporulation gene expression4e-0753.5
NC_016641:2394628:240160524016052402048444Paenibacillus terrae HPL-003 chromosome, complete genomeregulators of stationary/sporulation gene expression6e-0649.7