Pre_GI: BLASTP Hits

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Query: NC_004578:6138669:6137836 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 6137836, End: 6138672, Length: 837

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015556:4074367:410217641021764103027852Pseudomonas fulva 12-X chromosome, complete genomeformate dehydrogenase family accessory protein FdhD5e-88324
NC_020063:4653422:467394946739494674701753Enterobacteriaceae bacterium strain FGI 57, complete genomeformate dehydrogenase family accessory protein FdhD7e-43174
NC_012559:768939:772266772266773111846Laribacter hongkongensis HLHK9, complete genomeFdhD5e-42171
NC_020064:2960332:298242129824212983209789Serratia marcescens FGI94, complete genomeformate dehydrogenase family accessory protein FdhD1e-41170
NC_009348:1893292:191121419112141912038825Aeromonas salmonicida subsp. salmonicida A449, complete genomeformate dehydrogenase family accessory protein FdhD2e-41169
NC_015424:2357600:235674323567432357603861Aeromonas veronii B565 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD3e-41168
NC_015723:961909:967746967746968591846Cupriavidus necator N-1 chromosome 2, complete sequenceformate dehydrogenase formation protein FdhD3e-41168
NC_010067:3538169:355565335556533556477825Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-41167
NC_008786:2687688:269255226925522693385834Verminephrobacter eiseniae EF01-2, complete genomeformate dehydrogenase family accessory protein FdhD2e-40166
NC_008570:2768795:277168227716822772539858Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeformate dehydrogenase family accessory protein FdhD7e-40164
NC_004347:103967:117785117785118621837Shewanella oneidensis MR-1, complete genomeformate dehydrogenase accessory protein FdhD2e-38159
NC_013722:2476236:247884024788402479679840Xanthomonas albilineans, complete genomeputative formate dehydrogenase accessory protein2e-29129
NC_015138:4246787:4262100426210042633141215Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeprotein fdhD1e-28127
NC_016027:123853:153251153251154117867Gluconacetobacter xylinus NBRC 3288, complete genomeformate dehydrogenase family accessory protein3e-28125
NC_011206:1293880:130562813056281306476849Acidithiobacillus ferrooxidans ATCC 53993, complete genomeformate dehydrogenase family accessory protein FdhD2e-23109
NC_011761:1412420:142381014238101424658849Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeformate dehydrogenase family accessory protein FdhD2e-23109
NC_013769:2405248:240848824084882409255768Sulfolobus islandicus L.D.8.5 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD3e-2099.4
NC_012726:2287880:229112022911202291887768Sulfolobus islandicus M.16.4 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD3e-2099
NC_012632:2390831:239407123940712394838768Sulfolobus islandicus M.16.27 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD3e-2099
NC_012588:2297497:230073723007372301504768Sulfolobus islandicus M.14.25 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD3e-2099
NC_017275:2327479:233318823331882333955768Sulfolobus islandicus HVE10/4 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD8e-2097.8
NC_017276:2283933:229914622991462299913768Sulfolobus islandicus REY15A chromosome, complete genomeformate dehydrogenase family accessory protein FdhD8e-2097.8
NC_019673:1420198:144704114470411447865825Saccharothrix espanaensis DSM 44229 complete genomeFdhD-like protein7e-2097.8
NC_003106:91339:106786106786107553768Sulfolobus tokodaii str. 7, complete genomehypothetical formate dehydrogenase subunit fdhD9e-2097.4
NC_012623:231603:251540251540252307768Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD2e-1995.9
NC_011773:3399531:341138934113893412186798Bacillus cereus AH820 chromosome, complete genomeformate dehydrogenase accessory protein5e-1994.7
NC_005945:3321600:333236333323633333160798Bacillus anthracis str. Sterne, complete genomeformate dehydrogenase accessory protein1e-1894
NC_003997:3320906:333166933316693332466798Bacillus anthracis str. Ames, complete genomeformate dehydrogenase accessory protein1e-1894
NC_007530:3321033:333179633317963332593798Bacillus anthracis str. 'Ames Ancestor', complete genomeformate dehydrogenase accessory protein1e-1894
NC_012581:897957:906149906149906946798Bacillus anthracis str. CDC 684 chromosome, complete genomeformate dehydrogenase accessory protein1e-1894
NC_012659:3320933:333169633316963332493798Bacillus anthracis str. A0248, complete genomeformate dehydrogenase accessory protein1e-1894
NC_015711:2201225:2201225220122522026191395Myxococcus fulvus HW-1 chromosome, complete genomemolybdopterin-guanine dinucleotide biosynthesis protein B/ formate dehydrogenase family accessory protein FdhD4e-1892
NC_015065:162317:206694206694207629936Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceformate dehydrogenase family accessory protein FdhD9e-1787.4
NC_018664:3073022:307424730742473075029783Clostridium acidurici 9a chromosome, complete genomeformate dehydrogenase accessory protein FdhD5e-1581.6
NC_021184:2013058:201422420142242015018795Desulfotomaculum gibsoniae DSM 7213, complete genomeformate dehydrogenase family accessory protein FdhD2e-1479.7
NC_010337:1999405:199940519994052000358954Heliobacterium modesticaldum Ice1, complete genomeformate dehydrogenase family accessory protein fdhd5e-1478.6
NC_013315:3689422:371034737103473711180834Clostridium difficile CD196 chromosome, complete genomeformate dehydrogenase accessory protein6e-1478.2
NC_013939:1001974:101662110166211017415795Deferribacter desulfuricans SSM1, complete genomeformate dehydrogenase accessory protein FdhD8e-1477.8
NC_015573:2900906:290993129099312910731801Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeProtein fdhD2e-1376.6
NC_017187:1424371:142980414298041430637834Arcobacter butzleri ED-1, complete genomeformate dehydrogenase delta subunit3e-1375.9
NC_009850:1498111:150354615035461504379834Arcobacter butzleri RM4018, complete genomeFdhD/NarQ protein required for formate dehydrogenase activity3e-1375.9
NC_013204:2826500:287184028718402872685846Eggerthella lenta DSM 2243, complete genomeformate dehydrogenase family accessory protein FdhD6e-1375.1
NC_014654:2277461:227924522792452280060816Halanaerobium sp. 'sapolanicus' chromosome, complete genomeformate dehydrogenase family accessory protein FdhD8e-1374.3
NC_011146:2614500:2632077263207726334831407Geobacter bemidjiensis Bem, complete genomeformate dehydrogenase family accessory protein FdhD2e-1273.2
NC_014328:773095:781536781536781967432Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative formate dehydrogenase subunit FdhD9e-1270.9
NC_007907:4859735:487655548765554877355801Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1169.3
NC_018876:996855:102766910276691028442774Methanolobus psychrophilus R15 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD6e-1168.2
NC_007575:827222:847911847911848741831Sulfurimonas denitrificans DSM 1251, complete genomeformate dehydrogenase accessory protein7e-1168.2
NC_015562:1816000:183209618320961832785690Methanotorris igneus Kol 5 chromosome, complete genomeformate dehydrogenase family accessory protein FdhD9e-1167.4
NC_015216:2548057:256605025660502566802753Methanobacterium sp. AL-21 chromosome, complete genomeprotein fdhD4e-0962.4
NC_018870:115982:163271163271163918648Thermacetogenium phaeum DSM 12270 chromosome, complete genomeformate dehydrogenase accessory protein FdhD5e-0962
NC_015574:114426:133885133885134637753Methanobacterium sp. SWAN-1 chromosome, complete genomeProtein fdhD1e-0860.5
NC_014311:1106871:110910411091041109979876Ralstonia solanacearum PSI07 chromosome, complete genomeformate dehydrogenase accessory protein (fdhD)2e-0860.1
NC_009515:1409912:141251514125151413264750Methanobrevibacter smithii ATCC 35061, complete genomeformate dehydrogenase accessory protein FdhD, FdhD2e-0859.3
NC_019977:728922:737153737153737986834Methanomethylovorans hollandica DSM 15978, complete genomeformate dehydrogenase family accessory protein FdhD2e-0756.6