Pre_GI: BLASTP Hits

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Query: NC_004547:1837500:1840982 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1840982, End: 1841674, Length: 693

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003295:2787371:279963727996372800311675Ralstonia solanacearum GMI1000, complete genomePROBABLE GLUTATHIONE-S-TRANSFERASE PROTEIN6e-90330
NC_014500:2019113:202759220275922028266675Dickeya dadantii 3937 chromosome, complete genomeglutathione S-transferase, theta9e-81299
NC_012912:2800884:280770728077072808381675Dickeya zeae Ech1591, complete genomeGlutathione S-transferase domain protein1e-80299
NC_010552:2454776:246331724633172463997681Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceGlutathione S-transferase domain1e-70265
NC_017986:4790482:481071548107154811398684Pseudomonas putida ND6 chromosome, complete genomeglutathione S-transferase domain-containing protein8e-57220
NC_009512:2108686:212747221274722128155684Pseudomonas putida F1, complete genomeGlutathione S-transferase, N-terminal domain9e-56216
NC_003911:3453764:345993134599313460599669Silicibacter pomeroyi DSS-3, complete genomeglutathione S-transferase family protein3e-49194
NC_012856:3000839:301326730132673013878612Ralstonia pickettii 12D chromosome 1, complete genomeGlutathione S-transferase domain protein2e-1686.3
NC_010682:3313944:335182233518223352433612Ralstonia pickettii 12J chromosome 1, complete sequenceGlutathione S-transferase domain2e-1686.3
NC_014307:533975:541148541148541759612Ralstonia solanacearum CFBP2957 chromosome, complete genomestringent starvation protein a, regulator of transcription8e-1684
NC_015381:429940:436557436557437168612Burkholderia gladioli BSR3 chromosome 1, complete sequenceglutathione S-transferase9e-1684
NC_012724:359444:365613365613366224612Burkholderia glumae BGR1 chromosome 1, complete genomeGlutathione S-transferase9e-1684
NC_008542:483761:489824489824490435612Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceGlutathione S-transferase, N-terminal domain1e-1583.2
NC_008060:2913671:293621029362102936821612Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceglutathione S-transferase-like1e-1583.2
NC_010508:451184:457825457825458436612Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceGlutathione S-transferase domain1e-1583.2
NC_010002:6104500:610514561051456105756612Delftia acidovorans SPH-1, complete genomeGlutathione S-transferase domain3e-1582
NC_015563:1240978:125991512599151260526612Delftia sp. Cs1-4 chromosome, complete genomeglutathione S-transferase domain-containing protein3e-1582
NC_006350:3710641:372554737255473726158612Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative stringent starvation protein A5e-1581.3
NC_009074:3559211:357465935746593575270612Burkholderia pseudomallei 668 chromosome I, complete sequencestringent starvation protein A5e-1581.3
NC_014323:4619344:464292846429284643539612Herbaspirillum seropedicae SmR1 chromosome, complete genomestringent starvation transcription regulator A protein8e-1580.9
NC_015856:764651:766923766923767534612Collimonas fungivorans Ter331 chromosome, complete genomestringent starvation protein A1e-1480.1
NC_011992:773905:783569783569784180612Acidovorax ebreus TPSY, complete genomeGlutathione S-transferase domain protein2e-1479.7
NC_015731:3274739:329524432952443295843600Nitrosomonas sp. Is79A3 chromosome, complete genomeGlutathione S-transferase domain-containing protein4e-1168.2
NC_015740:2692023:271514327151432715823681Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeglutathione S-transferase8e-1167.4
NC_013716:4824541:484625948462594846897639Citrobacter rodentium ICC168, complete genomestringent starvation protein A4e-0961.6
NC_009075:1638789:165080216508021651458657Burkholderia pseudomallei 668 chromosome II, complete sequenceglutathione S-transferase family protein7e-0857.8
NC_006351:2759708:276481627648162765469654Burkholderia pseudomallei K96243 chromosome 2, complete sequenceglutathione S-transferase1e-0757
NC_010170:1551923:156749115674911568060570Bordetella petrii, complete genomeprobable glutathione S-transferase1e-0757
NC_015424:1603000:163103516310351631697663Aeromonas veronii B565 chromosome, complete genomeglutathione S-transferase family protein1e-0757
NC_014323:5219154:524037852403785241001624Herbaspirillum seropedicae SmR1 chromosome, complete genomeglutathione S-transferase1e-0756.6
NC_007516:1618033:162247116224711623034564Synechococcus sp. CC9605, complete genomeputative glutathione S-transferase1e-0756.6
NC_008254:2728693:272995827299582730569612Mesorhizobium sp. BNC1, complete genomeglutathione S-transferase-like1e-0756.6
NC_008570:1852286:187469318746931875355663Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeglutathione S-transferase4e-0755.1
NC_013440:1698047:171011717101171710752636Haliangium ochraceum DSM 14365, complete genomeGlutathione S-transferase domain protein6e-0754.7
NC_020064:1501441:150593715059371506641705Serratia marcescens FGI94, complete genomeglutathione S-transferase6e-0754.7
NC_011094:973140:987757987757988383627Salmonella enterica subsp. enterica serovar Schwarzengrund strglutathione S-transferase family protein6e-0754.7
NC_011992:3615517:361551736155173616131615Acidovorax ebreus TPSY, complete genomeGlutathione S-transferase domain protein5e-0754.7
NC_005125:4557889:457793545779354578576642Gloeobacter violaceus PCC 7421, complete genomehypothetical protein5e-0754.7
NC_016831:2108557:211303221130322113658627Salmonella enterica subsp. enterica serovar Gallinarum/pullorumglutathione s-transferase family protein6e-0754.3
NC_011294:878896:893519893519894145627Salmonella enterica subsp. enterica serovar Enteritidis strglutathione s-transferase family protein6e-0754.3
NC_011274:896802:911426911426912052627Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91glutathione s-transferase family protein6e-0754.3
NC_012125:894955:909578909578910204627Salmonella enterica subsp. enterica serovar Paratyphi C strainglutathione s-transferase family protein6e-0754.3
NC_006905:946418:962374962374963000627Salmonella enterica subsp. enterica serovar Choleraesuis strputative glutathione S-transferase6e-0754.3
NC_011205:944125:958763958763959389627Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853glutathione S-transferase7e-0754.3
NC_003197:920000:934627934627935253627Salmonella typhimurium LT2, complete genomeputative glutathione S-transferase6e-0754.3
NC_011083:967260:981894981894982520627Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,glutathione S-transferase family protein6e-0754.3
NC_017046:919249:933870933870934496627Salmonella enterica subsp. enterica serovar Typhimurium str. 798glutathione s-transferase family protein6e-0754.3
NC_016863:920346:934968934968935594627Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative glutathione S-transferase6e-0754.3
NC_016860:959609:974231974231974857627Salmonella enterica subsp. enterica serovar Typhimurium strputative glutathione S-transferase6e-0754.3
NC_016857:919266:933888933888934514627Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74glutathione s-transferase family protein6e-0754.3
NC_016856:921057:935679935679936305627Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative glutathione S-transferase6e-0754.3
NC_016810:919266:933888933888934514627Salmonella enterica subsp. enterica serovar Typhimurium strglutathione s-transferase family protein6e-0754.3
NC_011080:924326:938960938960939586627Salmonella enterica subsp. enterica serovar Newport str. SL254,glutathione S-transferase family protein8e-0753.9
NC_010102:2178594:218306821830682183694627Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0653.9
NC_015740:1017000:103609610360961036713618Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completestringent starvation protein A1e-0653.5
NC_010725:4035397:406989140698914070502612Methylobacterium populi BJ001, complete genomeGlutathione S-transferase domain1e-0653.5
NC_020064:3825916:382685138268513827489639Serratia marcescens FGI94, complete genomeglutathione S-transferase2e-0653.1
NC_010475:2896000:290162829016282902188561Synechococcus sp. PCC 7002, complete genomeglutathione S-transferase2e-0653.1
NC_015563:6357653:638188663818866382506621Delftia sp. Cs1-4 chromosome, complete genomeglutathione S-transferase domain-containing protein2e-0652.8
NC_014840:205723:257140257140257757618Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceglutathione S-transferase domain-containing protein3e-0652.4
NC_015677:3965716:396571639657163966330615Ramlibacter tataouinensis TTB310 chromosome, complete genomeglutathione S-transferase4e-0652
NC_015968:2195645:222500522250052225610606Enterobacter asburiae LF7a chromosome, complete genomeglutathione S-transferase domain-containing protein7e-0650.8
NC_010162:7571525:759098575909857591608624Sorangium cellulosum 'So ce 56', complete genomehypothetical protein8e-0650.8