Pre_GI: BLASTP Hits

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Query: NC_002947:4604582:4609454 Pseudomonas putida KT2440, complete genome

Start: 4609454, End: 4610386, Length: 933

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013592:1424560:144682414468241447600777Dickeya dadantii Ech586, complete genometype IV / VI secretion system protein, DotU family4e-47188
NC_013421:1143500:116609911660991166875777Pectobacterium wasabiae WPP163, complete genometype IV / VI secretion system protein, DotU family2e-45182
NC_005126:349658:391509391509392279771Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-43176
NC_008570:1986466:200714520071452007855711Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein2e-43176
NC_012962:293976:311260311260312030771Photorhabdus asymbiotica, complete genomehypothetical protein2e-42172
NC_014228:4331327:434755743475574348324768Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein (probable component of SST VI cluster)4e-42171
NC_013892:274297:278546278546279313768Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-40166
NC_012913:1832500:184591218459121846769858Aggregatibacter aphrophilus NJ8700, complete genomeVasF9e-38157
CP002185:234719:250784250784251545762Escherichia coli W, complete genomeT6SS-associated protein1e-35150
NC_016822:246715:262786262786263547762Shigella sonnei 53G, complete genomeputative membrane protein Aec269e-35147
NC_015740:110633:129227129227130108882Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein8e-34144
NC_009439:101174:100296100296101177882Pseudomonas mendocina ymp, complete genomehypothetical protein2e-32140
NC_015968:4117835:414576341457634146551789Enterobacter asburiae LF7a chromosome, complete genomeDotU family type IV / VI secretion system protein1e-30133
NC_004578:6138669:616088461608846161759876Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-29129
NC_007645:4423507:444428844442884445169882Hahella chejuensis KCTC 2396, complete genomehypothetical protein4e-28125
NC_017192:2216914:223378822337882234642855Arcobacter sp. L, complete genomehypothetical protein3e-23108
NC_004603:1519904:152121115212111522017807Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein1e-22107
NC_014733:1223359:1240286124028612416201335Methylovorus sp. MP688 chromosome, complete genomeompa/motb domain protein2e-20100
NC_008314:1275617:1290293129029312916001308Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane protein, OmpA/MotB-family4e-1995.9
NC_004605:1092476:1098604109860410999051302Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein2e-1789.7
NC_008313:691692:7089587089587102351278Ralstonia eutropha H16 chromosome 1, complete sequenceouter membrane protein2e-1789.7
NC_010086:871723:8897988897988910931296Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion system OmpA/MotB family protein1e-1687.4
NC_010805:1576735:1584211158421115855091299Burkholderia multivorans ATCC 17616 chromosome 2, completeOmpA/MotB domain protein1e-1687.4
NC_008391:271254:2861002861002873981299Burkholderia cepacia AMMD chromosome 2, complete sequenceOmpA/MotB domain protein2e-1686.7
NC_007511:1094050:1108818110881811101221305Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein2e-1686.7
NC_012856:1585989:159849215984921599475984Ralstonia pickettii 12D chromosome 1, complete genometype IV / VI secretion system protein, DotU family5e-1685.1
NC_011988:1036618:1059839105983910613741536Agrobacterium vitis S4 chromosome 2, complete genomeOmpA-type porin1e-1377.4
NC_013282:1256769:1279380127938012806541275Cronobacter turicensis, complete genomehypothetical protein7e-1375.1
NC_009802:114749:135621135621136385765Campylobacter concisus 13826, complete genomeaspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B)8e-1271.2
NC_008391:271254:2915422915422927561215Burkholderia cepacia AMMD chromosome 2, complete sequenceOmpA/MotB domain protein6e-1168.6
NC_004917:241053:242444242444243232789Helicobacter hepaticus ATCC 51449, complete genomehypothetical protein8e-1167.8
NC_007511:1094050:1114275111427511154891215Burkholderia sp. 383 chromosome 2, complete sequenceouter membrane protein, OmpA/MotB family4e-1065.5
NC_014323:4619344:463808446380844638857774Herbaspirillum seropedicae SmR1 chromosome, complete genometype IV / VI secretion system transmembrane protein5e-0962
NC_010086:871723:8952398952398964561218Burkholderia multivorans ATCC 17616 chromosome 2, completetype IV / VI secretion system protein, DotU family1e-0861.2
NC_010805:1576735:1578848157884815800651218Burkholderia multivorans ATCC 17616 chromosome 2, completeputative OmpA/MotB family outer membrane protein1e-0861.2
NC_010717:3868000:387028538702853871073789Xanthomonas oryzae pv. oryzae PXO99A, complete genomehypothetical protein9e-0857.8
NC_008563:3119284:312061831206183121283666Escherichia coli APEC O1, complete genomehypothetical protein2e-0756.6
NC_015057:30743:300123001230746735Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequencetype IV / VI secretion system protein, DotU family8e-0754.7
NC_006350:3710641:371639137163913717176786Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein9e-0754.7
NC_009074:3559211:356550135655013566286786Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein9e-0754.7
NC_009076:3564500:356693035669303567715786Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein9e-0754.7
NC_014355:1865003:188203218820321882730699Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-0654.3
NC_014310:785220:802006802006802797792Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein2e-0653.5
NC_007434:3973145:397461139746113975273663Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein3e-0653.1
NC_007510:409843:420931420931421713783Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein4e-0652.8
NC_011283:942594:959882959882960547666Klebsiella pneumoniae 342 chromosome, complete genometype IV/VI secretion system protein, DotU family6e-0651.6