Pre_GI: BLASTN Hits

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Query: NC_017986:3283433 Pseudomonas putida ND6 chromosome, complete genome

Start: 3283433, End: 3307414, Length: 23982

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004129:62409046240904627459933696Pseudomonas fluorescens Pf-5, complete genome01358BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,01183BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome01047BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome01021BLASTN svgBLASTP svg
NC_002947:61236086123608614375120144Pseudomonas putida KT2440, complete genome01013BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome0967BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome0789BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome3e-126460BLASTN svgBLASTP svg
NC_015410:26985722698572274463646065Pseudomonas mendocina NK-01 chromosome, complete genome7e-121442BLASTN svgBLASTP svg
NC_014532:2108897*2108897214516836272Halomonas elongata DSM 2581, complete genome9e-102379BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-94355BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome7e-84319BLASTN svgBLASTP svg
NC_008825:25649652564965258966024696Methylibium petroleiphilum PM1, complete genome3e-83317BLASTN svgBLASTP svg
NC_007651:3719191*3719191374181722627Burkholderia thailandensis E264 chromosome I, complete sequence4e-79303BLASTN svgBLASTP svg
NC_009937:4090404*4090404411705426651Azorhizobium caulinodans ORS 571, complete genome9e-62246BLASTN svgBLASTP svg
NC_012792:38567038567040991424245Variovorax paradoxus S110 chromosome 2, complete genome5e-54220BLASTN svgBLASTP svg
NC_007963:32253063225306325338328078Chromohalobacter salexigens DSM 3043, complete genome3e-49204BLASTN svgBLASTP svg
NC_010617:19103881910388192887618489Kocuria rhizophila DC2201, complete genome1e-39172BLASTN svgBLASTP svg
NC_007963:2555012*2555012257573920728Chromohalobacter salexigens DSM 3043, complete genome6e-35157BLASTN svgBLASTP svg
NC_015957:32821833282183330581123629Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-32149BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome2e-32149BLASTN svgBLASTP svg
NC_013235:1938889*1938889196008021192Nakamurella multipartita DSM 44233, complete genome6e-32147BLASTN svgBLASTP svg
NC_008269:86800086800091059942600Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence2e-29139BLASTN svgBLASTP svg
CU928145:39585723958572397962121050Escherichia coli 55989 chromosome, complete genome6e-23117BLASTN svgBLASTP svg
NC_009778:41880004188000423044042441Enterobacter sakazakii ATCC BAA-894, complete genome6e-23117BLASTN svgBLASTP svg
NC_011748:39585723958572397962121050Escherichia coli 55989, complete genome6e-23117BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome3e-21111BLASTN svgBLASTP svg
NC_009142:25655612565561258937023810Saccharopolyspora erythraea NRRL 2338, complete genome8e-19103BLASTN svgBLASTP svg
NC_012560:42019694201969423232530357Azotobacter vinelandii DJ, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013411:33147993314799335852243724Geobacillus sp. Y412MC61, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014915:33207683320768336792347156Geobacillus sp. Y412MC52 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_021150:42019654201965423232130357Azotobacter vinelandii CA6, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014098:1553900*1553900157609922200Bacillus tusciae DSM 2912 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007645:6461267*6461267647977518509Hahella chejuensis KCTC 2396, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007951:570500*57050060471734218Burkholderia xenovorans LB400 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_008269:42889842889845259923702Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_012779:25861752586175261323427060Edwardsiella ictaluri 93-146, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010682:19139411913941193635322413Ralstonia pickettii 12J chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_012721:26948292694829272122926401Burkholderia glumae BGR1 chromosome 2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005773:5310339*5310339533285822520Pseudomonas syringae pv. phaseolicola 1448A, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008782:13080071308007132716219156Acidovorax sp. JS42, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018868:61911361911367007150959Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015683:22799042279904231865238749Corynebacterium ulcerans BR-AD22 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014831:19066911906691195238745697Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013730:27992872799287282116221876Spirosoma linguale DSM 74, complete genome3e-0661.9BLASTN svgBLASTP svg