Pre_GI: BLASTN Hits

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Query: NC_016830:4999946 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4999946, End: 5023317, Length: 23372

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021150:2348214*2348214238327335060Azotobacter vinelandii CA6, complete genome0852BLASTN svgBLASTP svg
NC_012560:2348202*2348202238326135060Azotobacter vinelandii DJ, complete genome0852BLASTN svgBLASTP svg
NC_004578:38173303817330384200124672Pseudomonas syringae pv. tomato str. DC3000, complete genome0690BLASTN svgBLASTP svg
NC_005773:56366065636606566314526540Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-167595BLASTN svgBLASTP svg
NC_015733:19767521976752200134124590Pseudomonas putida S16 chromosome, complete genome8e-164585BLASTN svgBLASTP svg
NC_005773:21771842177184220009922916Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-160573BLASTN svgBLASTP svg
NC_020209:32620003262000328797525976Pseudomonas poae RE*1-1-14, complete genome7e-149535BLASTN svgBLASTP svg
NC_004129:22348512234851226009925249Pseudomonas fluorescens Pf-5, complete genome1e-76295BLASTN svgBLASTP svg
NC_004129:53738865373886545259978714Pseudomonas fluorescens Pf-5, complete genome1e-54222BLASTN svgBLASTP svg
NC_008390:20182012018201204273624536Burkholderia cepacia AMMD chromosome 1, complete sequence4e-36161BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome6e-32147BLASTN svgBLASTP svg
NC_007005:2191500*2191500223078139282Pseudomonas syringae pv. syringae B728a, complete genome2e-31145BLASTN svgBLASTP svg
NC_013851:24414072441407246552624120Allochromatium vinosum DSM 180 chromosome, complete genome9e-31143BLASTN svgBLASTP svg
NC_004129:43333024333302435159918298Pseudomonas fluorescens Pf-5, complete genome1e-29139BLASTN svgBLASTP svg
NC_008702:1094663*1094663111848823826Azoarcus sp. BH72, complete genome2e-22115BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-20107BLASTN svgBLASTP svg
NC_016002:10484201048420108220633787Pseudogulbenkiania sp. NH8B, complete genome8e-19103BLASTN svgBLASTP svg
NC_007005:16050001605000162491619917Pseudomonas syringae pv. syringae B728a, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007651:2166000*2166000218478418785Burkholderia thailandensis E264 chromosome I, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_007434:1809946*1809946187124661301Burkholderia pseudomallei 1710b chromosome I, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_009512:56325915632591568653153941Pseudomonas putida F1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015856:34369513436951346108124131Collimonas fungivorans Ter331 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009348:2034500*2034500205759923100Aeromonas salmonicida subsp. salmonicida A449, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004631:53125453125455515123898Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-1281.8BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012660:4558122*4558122459234134220Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010681:13256321325632135109925468Burkholderia phytofirmans PsJN chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_007275:112112521125Pseudomonas syringae pv. phaseolicola 1448A small plasmid, complete1e-0869.9BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012724:30703863070386309007619691Burkholderia glumae BGR1 chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002927:3827211*3827211386878341573Bordetella bronchiseptica RB50, complete genome3e-0661.9BLASTN svgBLASTP svg