Pre_GI: BLASTN Hits

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Query: NC_015379:89441 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 89441, End: 117816, Length: 28376

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020209:4768500*4768500481226743768Pseudomonas poae RE*1-1-14, complete genome01899BLASTN svgBLASTP svg
NC_007508:4593446*4593446461871425269Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome1e-126462BLASTN svgBLASTP svg
NC_003919:4568892*4568892459309924208Xanthomonas axonopodis pv. citri str. 306, complete genome8e-115422BLASTN svgBLASTP svg
NC_002977:92558892558894955323966Methylococcus capsulatus str. Bath, complete genome7e-97363BLASTN svgBLASTP svg
NC_008752:3902637*3902637393751334877Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-79305BLASTN svgBLASTP svg
NC_015379:67145456714545674216027616Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-38168BLASTN svgBLASTP svg
NC_009075:922109221012709934890Burkholderia pseudomallei 668 chromosome II, complete sequence2e-35159BLASTN svgBLASTP svg
NC_007435:19143751914375195826743893Burkholderia pseudomallei 1710b chromosome II, complete sequence2e-35159BLASTN svgBLASTP svg
NC_006351:730007300010112828129Burkholderia pseudomallei K96243 chromosome 2, complete sequence2e-35159BLASTN svgBLASTP svg
NC_014012:20728920728922623418946Shewanella violacea DSS12, complete genome3e-34155BLASTN svgBLASTP svg
NC_009078:749547495410871533762Burkholderia pseudomallei 1106a chromosome II, complete sequence1e-30143BLASTN svgBLASTP svg
NC_015186:28848662884866290438219517Acidiphilium multivorum AIU301, complete genome2e-20109BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-19105BLASTN svgBLASTP svg
NC_015138:5276857*5276857530246825612Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1695.6BLASTN svgBLASTP svg
NC_008752:5213431*5213431523609922669Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-1487.7BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007492:39543453954345399809943755Pseudomonas fluorescens PfO-1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,9e-1383.8BLASTN svgBLASTP svg
NC_007492:17355951735595175753521941Pseudomonas fluorescens PfO-1, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_008260:125500*12550014520219703Alcanivorax borkumensis SK2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008726:39159793915979394187225894Mycobacterium vanbaalenii PYR-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010172:575005750011716259663Methylobacterium extorquens PA1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014210:3763940*3763940379109927160Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_015671:15408601540860156478123922Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015730:1107840*1107840113310925270Roseobacter litoralis Och 149 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015387:19657111965711198901123301Marinithermus hydrothermalis DSM 14884 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_012803:13022611302261132380421544Micrococcus luteus NCTC 2665, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013169:1661135*1661135168009918965Kytococcus sedentarius DSM 20547, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014831:19066911906691195238745697Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010617:14289021428902145226023359Kocuria rhizophila DC2201, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007947:1556437*1556437158119324757Methylobacillus flagellatus KT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015594:579354*57935460476625413Sphingobium chlorophenolicum L-1 chromosome chromosome 2, complete2e-0765.9BLASTN svgBLASTP svg
NC_020054:1335699*1335699135810022402Fibrella aestuarina BUZ 2 drat genome2e-0765.9BLASTN svgBLASTP svg
NC_003888:23059012305901232945223552Streptomyces coelicolor A3(2), complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009664:37189273718927374705528129Kineococcus radiotolerans SRS30216, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012791:72181372181376114739335Variovorax paradoxus S110 chromosome 1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013441:27888062788806282218133376Gordonia bronchialis DSM 43247, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013510:1786194*1786194181369827505Thermomonospora curvata DSM 43183, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015514:24146172414617243874024124Cellulomonas fimi ATCC 484 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015588:19657871965787198857522789Isoptericola variabilis 225 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014210:37421123742112376235620245Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome3e-0661.9BLASTN svgBLASTP svg