Pre_GI: BLASTN Hits

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Query: NC_014169:231210 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 231210, End: 252224, Length: 21015

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015052:47194447194450736635423Bifidobacterium longum subsp. infantis 157F, complete genome0694BLASTN svgBLASTP svg
NC_008618:17297391729739176070830970Bifidobacterium adolescentis ATCC 15703, complete genome0668BLASTN svgBLASTP svg
NC_014815:841484*84148489809956616Micromonospora sp. L5 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_000962:37815013781501380757326073Mycobacterium tuberculosis H37Rv, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002755:31109293110929312975718829Mycobacterium tuberculosis CDC1551, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002755:47287247287249645723586Mycobacterium tuberculosis CDC1551, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002945:30733703073370309459921230Mycobacterium bovis AF2122/97, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008769:30702663070266308959919334Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009525:2635792*2635792265864122850Mycobacterium tuberculosis H37Ra, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009525:31287863128786314904720262Mycobacterium tuberculosis H37Ra, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009525:37940003794000381625122252Mycobacterium tuberculosis H37Ra, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009565:31280943128094314823720144Mycobacterium tuberculosis F11, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009565:34857723485772350477419003Mycobacterium tuberculosis F11, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012207:30630393063039308477921741Mycobacterium bovis BCG str. Tokyo 172, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_000962:31168183116818313633319516Mycobacterium tuberculosis H37Rv, complete genome4e-0867.9BLASTN svgBLASTP svg