Query: NC_014169:231210 Bifidobacterium longum subsp. longum JDM301 chromosome, complete
Start: 231210, End: 252224, Length: 21015
Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015052:471944 | 471944 | 507366 | 35423 | Bifidobacterium longum subsp. infantis 157F, complete genome | 0 | 694 | BLASTN svg | BLASTP svg |
NC_008618:1729739 | 1729739 | 1760708 | 30970 | Bifidobacterium adolescentis ATCC 15703, complete genome | 0 | 668 | BLASTN svg | BLASTP svg |
NC_014815:841484* | 841484 | 898099 | 56616 | Micromonospora sp. L5 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_000962:3781501 | 3781501 | 3807573 | 26073 | Mycobacterium tuberculosis H37Rv, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_002755:3110929 | 3110929 | 3129757 | 18829 | Mycobacterium tuberculosis CDC1551, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_002755:472872 | 472872 | 496457 | 23586 | Mycobacterium tuberculosis CDC1551, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_002945:3073370 | 3073370 | 3094599 | 21230 | Mycobacterium bovis AF2122/97, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008769:3070266 | 3070266 | 3089599 | 19334 | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009525:2635792* | 2635792 | 2658641 | 22850 | Mycobacterium tuberculosis H37Ra, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009525:3128786 | 3128786 | 3149047 | 20262 | Mycobacterium tuberculosis H37Ra, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009525:3794000 | 3794000 | 3816251 | 22252 | Mycobacterium tuberculosis H37Ra, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009565:3128094 | 3128094 | 3148237 | 20144 | Mycobacterium tuberculosis F11, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009565:3485772 | 3485772 | 3504774 | 19003 | Mycobacterium tuberculosis F11, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012207:3063039 | 3063039 | 3084779 | 21741 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_000962:3116818 | 3116818 | 3136333 | 19516 | Mycobacterium tuberculosis H37Rv, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |