Pre_GI: BLASTN Hits

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Query: NC_013929:7606749 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 7606749, End: 7630120, Length: 23372

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:74539947453994748164227649Streptomyces avermitilis MA-4680, complete genome01515BLASTN svgBLASTP svg
NC_018750:18355001835500185771922220Streptomyces venezuelae ATCC 10712, complete genome01447BLASTN svgBLASTP svg
NC_021177:17368541736854177659939746Streptomyces fulvissimus DSM 40593, complete genome01255BLASTN svgBLASTP svg
NC_010572:6463939*6463939649468830750Streptomyces griseus subsp. griseus NBRC 13350, complete genome01243BLASTN svgBLASTP svg
NC_015953:1581542*1581542160650824967Streptomyces sp. SirexAA-E chromosome, complete genome01207BLASTN svgBLASTP svg
NC_015957:8103472*8103472812858025109Streptomyces violaceusniger Tu 4113 chromosome, complete genome0807BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome0745BLASTN svgBLASTP svg
NC_013510:3324978*3324978334783522858Thermomonospora curvata DSM 43183, complete genome8e-53216BLASTN svgBLASTP svg
NC_009142:27250002725000275437129372Saccharopolyspora erythraea NRRL 2338, complete genome8e-50206BLASTN svgBLASTP svg
NC_014210:3763940*3763940379109927160Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-49204BLASTN svgBLASTP svg
NC_006361:49830549830551709918795Nocardia farcinica IFM 10152, complete genome7e-47196BLASTN svgBLASTP svg
NC_018524:4049990*4049990407854328554Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome2e-41178BLASTN svgBLASTP svg
NC_015951:46000460007890132902Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete3e-40174BLASTN svgBLASTP svg
NC_008699:29167522916752293906622315Nocardioides sp. JS614, complete genome2e-35159BLASTN svgBLASTP svg
NC_013595:19649319649322011923627Streptosporangium roseum DSM 43021, complete genome2e-34155BLASTN svgBLASTP svg
NC_013131:44734104473410449211718708Catenulispora acidiphila DSM 44928, complete genome4e-33151BLASTN svgBLASTP svg
NC_015671:19500811950081197227622196Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-29139BLASTN svgBLASTP svg
NC_013131:8480384*8480384852686646483Catenulispora acidiphila DSM 44928, complete genome2e-25125BLASTN svgBLASTP svg
NC_010617:13972741397274142856131288Kocuria rhizophila DC2201, complete genome3e-21111BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_015656:2484749*2484749251548430736Frankia symbiont of Datisca glomerata chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_008278:5012000*5012000505245140452Frankia alni ACN14a, complete genome3e-18101BLASTN svgBLASTP svg
NC_008278:2732890*2732890278559152702Frankia alni ACN14a, complete genome3e-18101BLASTN svgBLASTP svg
NC_015422:3836911*3836911386031223402Alicycliphilus denitrificans K601 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_019673:13847951384795141142926635Saccharothrix espanaensis DSM 44229 complete genome5e-1797.6BLASTN svgBLASTP svg
NC_003888:21174821174823351821771Streptomyces coelicolor A3(2), complete genome5e-1797.6BLASTN svgBLASTP svg
NC_014158:2561441*2561441258525523815Tsukamurella paurometabola DSM 20162 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_003888:13953191395319141826922951Streptomyces coelicolor A3(2), complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015711:3546500*3546500357174025241Myxococcus fulvus HW-1 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_005296:45742134574213461698142769Rhodopseudomonas palustris CGA009, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_011886:1891077*1891077192459933523Arthrobacter chlorophenolicus A6, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_019964:93096693096695259921634Halovivax ruber XH-70, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014168:2575799*2575799261011334315Segniliparus rotundus DSM 44985 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013501:931418*93141895819726780Rhodothermus marinus DSM 4252, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_018681:867230*86723090173034501Nocardia brasiliensis ATCC 700358 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008705:49754024975402499824322842Mycobacterium sp. KMS, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012791:22330982233098225286719770Variovorax paradoxus S110 chromosome 1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014318:5586287*5586287562248536199Amycolatopsis mediterranei U32 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014318:63953926395392646309967708Amycolatopsis mediterranei U32 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015948:2421933*2421933244059218660Haloarcula hispanica ATCC 33960 chromosome chromosome I, complete5e-1177.8BLASTN svgBLASTP svg
NC_021177:21398382139838216484225005Streptomyces fulvissimus DSM 40593, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007516:13231051323105134891925815Synechococcus sp. CC9605, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008148:2053467*2053467207149018024Rubrobacter xylanophilus DSM 9941, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012560:68251682518837920129Azotobacter vinelandii DJ, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014844:26389942638994265855019557Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_021150:68251682518837920129Azotobacter vinelandii CA6, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013440:60457086045708606679721090Haliangium ochraceum DSM 14365, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013159:1225866*1225866124823622371Saccharomonospora viridis DSM 43017, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010407:24061132406113242499918887Clavibacter michiganensis subsp. sepedonicus chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_008095:1401919*1401919142623224314Myxococcus xanthus DK 1622, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010612:61131556113155613265419500Mycobacterium marinum M, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013715:699400*69940072209922700Rothia mucilaginosa DY-18, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015856:63335363335365700023648Collimonas fungivorans Ter331 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018581:3202281*3202281322702624746Gordonia sp. KTR9 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020133:57106615710661573224421584Mycobacterium liflandii 128FXT, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014831:78601178601180816322153Thermaerobacter marianensis DSM 12885 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008702:40644704064470409211327644Azoarcus sp. BH72, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005773:69499069499072559930610Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008278:28633552863355288511221758Frankia alni ACN14a, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012792:54796754796758771739751Variovorax paradoxus S110 chromosome 2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012803:15191381519138153782318686Micrococcus luteus NCTC 2665, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013858:47729847729850922131924Azospirillum sp. B510 plasmid pAB510d, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_018750:82105008210500823849928000Streptomyces venezuelae ATCC 10712, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015556:819503*81950384290123399Pseudomonas fulva 12-X chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014623:50299325029932508446054529Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010557:67965667965674320963554Burkholderia ambifaria MC40-6 chromosome 3, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_006361:36153223615322363714921828Nocardia farcinica IFM 10152, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008705:3201817*3201817322309921283Mycobacterium sp. KMS, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012704:1641684*1641684166548523802Corynebacterium kroppenstedtii DSM 44385, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013740:15401*154013926023860Acidaminococcus fermentans DSM 20731, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008786:3323167*3323167337505651890Verminephrobacter eiseniae EF01-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009921:34557833455783347739221610Frankia sp. EAN1pec, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010407:11144081114408113894624539Clavibacter michiganensis subsp. sepedonicus chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_013521:2254534*2254534227574521212Sanguibacter keddieii DSM 10542, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013595:4031947*4031947406329831352Streptosporangium roseum DSM 43021, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013715:890784*89078491633025547Rothia mucilaginosa DY-18, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014550:2091797*2091797212997638180Arthrobacter arilaitensis Re117, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014666:4547873*4547873457124523373Frankia sp. EuI1c chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008702:36996536996539538125417Azoarcus sp. BH72, complete genome3e-0661.9BLASTN svgBLASTP svg