Pre_GI: BLASTN Hits

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Query: NC_013929:6371019 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6371019, End: 6394449, Length: 23431

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:62950786295078632109926022Streptomyces avermitilis MA-4680, complete genome0872BLASTN svgBLASTP svg
NC_019673:526000*52600056212836129Saccharothrix espanaensis DSM 44229 complete genome3e-46194BLASTN svgBLASTP svg
NC_013595:8553904*8553904857655422651Streptosporangium roseum DSM 43021, complete genome2e-34155BLASTN svgBLASTP svg
NC_013729:2157785*2157785219409936315Kribbella flavida DSM 17836, complete genome2e-22115BLASTN svgBLASTP svg
NC_020302:21905002190500220939218893Corynebacterium halotolerans YIM 70093 = DSM 44683, complete8e-22113BLASTN svgBLASTP svg
NC_009077:3851203*3851203387313021928Mycobacterium sp. JLS, complete genome8e-22113BLASTN svgBLASTP svg
NC_008278:6717485*6717485674098923505Frankia alni ACN14a, complete genome1e-20109BLASTN svgBLASTP svg
NC_019673:1275627*1275627131011934493Saccharothrix espanaensis DSM 44229 complete genome2e-19105BLASTN svgBLASTP svg
NC_013093:1157476*1157476117633118856Actinosynnema mirum DSM 43827, complete genome3e-18101BLASTN svgBLASTP svg
NC_015656:1592021*1592021161171419694Frankia symbiont of Datisca glomerata chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015434:1313979*1313979133209918121Verrucosispora maris AB-18-032 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014815:1490957*1490957151776526809Micromonospora sp. L5 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014391:1226922*1226922125015223231Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013947:33471743347174338411536942Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013757:14996431499643151759917957Geodermatophilus obscurus DSM 43160, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014666:6940532*6940532696752226991Frankia sp. EuI1c chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013947:23512082351208237202720820Stackebrandtia nassauensis DSM 44728 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_013235:1938889*1938889196008021192Nakamurella multipartita DSM 44233, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_012704:1641684*1641684166548523802Corynebacterium kroppenstedtii DSM 44385, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_002973:72328*723289511822791Listeria monocytogenes str. 4b F2365, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003212:57061*5706110108744027Listeria innocua Clip11262, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013947:16966711696671172434027670Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015186:36502*365025988323382Acidiphilium multivorum AIU301, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020207:2240115*2240115226013620022Enterococcus faecium NRRL B-2354, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_016027:2047954*2047954211021762264Gluconacetobacter xylinus NBRC 3288, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008278:18450001845000186972124722Frankia alni ACN14a, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007778:3784104*3784104381456530462Rhodopseudomonas palustris HaA2, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_005303:272915*27291531815445240Onion yellows phytoplasma OY-M, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007716:467235*46723550266435430Aster yellows witches'-broom phytoplasma AYWB, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010544:671431*67143169723925809Candidatus Phytoplasma australiense, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011757:5693584*5693584571331619733Methylobacterium chloromethanicum CM4, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015942:1711026*1711026173659925574Acidithiobacillus ferrivorans SS3 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_016011:59070*590708009921030Listeria ivanovii subsp. ivanovii PAM 55, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011883:1182000*1182000120391521916Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,1e-0869.9BLASTN svgBLASTP svg
NC_009662:222964*22296426489641933Nitratiruptor sp. SB155-2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009667:19348181934818195721622399Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_011527:12559981255998129002234025Coxiella burnetii CbuG_Q212, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011528:14920001492000152159929600Coxiella burnetii CbuK_Q154, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014318:7821227*7821227785959938373Amycolatopsis mediterranei U32 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015437:2164997*2164997218559920603Selenomonas sputigena ATCC 35185 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_016024:156000*15600017748221483Candidatus Chloracidobacterium thermophilum B chromosome chromosome4e-0867.9BLASTN svgBLASTP svg
NC_014833:3667748*3667748368799920252Ruminococcus albus 7 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014833:1539678*1539678155896019283Ruminococcus albus 7 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009921:66910896691089673309942011Frankia sp. EAN1pec, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020301:669000*66900071117642177Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010674:3674739*3674739372221147473Clostridium botulinum B str. Eklund 17B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010723:3530000*3530000357960049601Clostridium botulinum E3 str. Alaska E43, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013131:7530000*7530000755241822419Catenulispora acidiphila DSM 44928, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013132:782846*78284680287020025Chitinophaga pinensis DSM 2588, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014328:1*11850018500Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014328:4471995*4471995450215530161Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020291:6216000*6216000625247336474Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010520:3526883*3526883355123524353Clostridium botulinum A3 str. Loch Maree, complete genome3e-0661.9BLASTN svgBLASTP svg