Pre_GI: BLASTN Hits

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Query: NC_013929:3299736 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3299736, End: 3348925, Length: 49190

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:3652587*3652587369577343187Streptomyces avermitilis MA-4680, complete genome01176BLASTN svgBLASTP svg
NC_014814:38920003892000392242630427Mycobacterium sp. Spyr1 chromosome, complete genome0771BLASTN svgBLASTP svg
NC_013235:5127148*5127148516430037153Nakamurella multipartita DSM 44233, complete genome0668BLASTN svgBLASTP svg
NC_008611:3579500*3579500360709927600Mycobacterium ulcerans Agy99, complete genome3e-103385BLASTN svgBLASTP svg
NC_003888:5790104*5790104582064330540Streptomyces coelicolor A3(2), complete genome2e-98369BLASTN svgBLASTP svg
NC_015635:48643494864349488758323235Microlunatus phosphovorus NM-1, complete genome6e-86327BLASTN svgBLASTP svg
NC_003155:49066394906639493178025142Streptomyces avermitilis MA-4680, complete genome9e-76293BLASTN svgBLASTP svg
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome2e-52216BLASTN svgBLASTP svg
NC_018750:43330644333064436046827405Streptomyces venezuelae ATCC 10712, complete genome4e-50208BLASTN svgBLASTP svg
NC_003888:36027533602753362646223710Streptomyces coelicolor A3(2), complete genome2e-46196BLASTN svgBLASTP svg
NC_014550:25620532562053259431732265Arthrobacter arilaitensis Re117, complete genome3e-38168BLASTN svgBLASTP svg
NC_019902:18631621863162188731124150Thioalkalivibrio nitratireducens DSM 14787, complete genome1e-37167BLASTN svgBLASTP svg
NC_003888:6103534*6103534615544651913Streptomyces coelicolor A3(2), complete genome5e-37165BLASTN svgBLASTP svg
NC_020133:24219652421965244809926135Mycobacterium liflandii 128FXT, complete genome2e-36163BLASTN svgBLASTP svg
NC_021177:3997727*3997727401925421528Streptomyces fulvissimus DSM 40593, complete genome2e-33153BLASTN svgBLASTP svg
NC_013510:5115500*5115500514328527786Thermomonospora curvata DSM 43183, complete genome8e-33151BLASTN svgBLASTP svg
NC_014215:1929000*1929000194714618147Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,8e-30141BLASTN svgBLASTP svg
NC_014216:23345682334568235571921152Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome1e-28137BLASTN svgBLASTP svg
NC_009943:27215827215829931927162Candidatus Desulfococcus oleovorans Hxd3, complete genome1e-28137BLASTN svgBLASTP svg
NC_012803:3691*36914264438954Micrococcus luteus NCTC 2665, complete genome5e-28135BLASTN svgBLASTP svg
NC_013510:4484000*4484000450600622007Thermomonospora curvata DSM 43183, complete genome2e-27133BLASTN svgBLASTP svg
NC_021177:14182131418213144186323651Streptomyces fulvissimus DSM 40593, complete genome1e-25127BLASTN svgBLASTP svg
NC_007164:14343051434305147733743033Corynebacterium jeikeium K411, complete genome2e-24123BLASTN svgBLASTP svg
NC_010572:3925803*3925803395628730485Streptomyces griseus subsp. griseus NBRC 13350, complete genome3e-23119BLASTN svgBLASTP svg
NC_019673:8161242*8161242818734226101Saccharothrix espanaensis DSM 44229 complete genome2e-21113BLASTN svgBLASTP svg
NC_010581:29990022999002304648947488Beijerinckia indica subsp. indica ATCC 9039, complete genome2e-21113BLASTN svgBLASTP svg
NC_013093:1213908*1213908124337529468Actinosynnema mirum DSM 43827, complete genome1e-19107BLASTN svgBLASTP svg
NC_013947:2113941*2113941214484730907Stackebrandtia nassauensis DSM 44728 chromosome, complete genome7e-18101BLASTN svgBLASTP svg
NC_013235:2257899*2257899229859940701Nakamurella multipartita DSM 44233, complete genome7e-18101BLASTN svgBLASTP svg
NC_011901:18608871860887191210351217Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete7e-18101BLASTN svgBLASTP svg
NC_006087:676318*67631869499818681Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_014165:925009250011009917600Thermobispora bispora DSM 43833 chromosome, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_013595:9547254*9547254957863931386Streptosporangium roseum DSM 43021, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_013510:991827*991827101259920773Thermomonospora curvata DSM 43183, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_013093:1411882*1411882143830226421Actinosynnema mirum DSM 43827, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_003888:4377000*4377000439557918580Streptomyces coelicolor A3(2), complete genome6e-1281.8BLASTN svgBLASTP svg
NC_013595:15150015150017859927100Streptosporangium roseum DSM 43021, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_014391:621062*62106264468923628Micromonospora aurantiaca ATCC 27029 chromosome, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_014815:841484*84148489809956616Micromonospora sp. L5 chromosome, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_018870:1506918*1506918152914322226Thermacetogenium phaeum DSM 12270 chromosome, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_016002:10484201048420108220633787Pseudogulbenkiania sp. NH8B, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013720:1382561*1382561140820425644Pirellula staleyi DSM 6068, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013508:31889783188978324937660399Edwardsiella tarda EIB202, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_018750:62378756237875626148023606Streptomyces venezuelae ATCC 10712, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_012779:33168773316877333727020394Edwardsiella ictaluri 93-146, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_014220:1269870*1269870128997920110Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_015589:870804*87080488987819075Desulfotomaculum ruminis DSM 2154 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_019673:8799533*8799533883442634894Saccharothrix espanaensis DSM 44229 complete genome2e-0973.8BLASTN svgBLASTP svg
NC_019977:13533321353332137609922768Methanomethylovorans hollandica DSM 15978, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013440:38131323813132384058127450Haliangium ochraceum DSM 14365, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_010994:85950085950087980320304Rhizobium etli CIAT 652, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_021177:4124839*4124839415343928601Streptomyces fulvissimus DSM 40593, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_008278:53997155399715542275223038Frankia alni ACN14a, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014376:869749*86974989064520897Clostridium saccharolyticum WM1 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015942:2213710*2213710223882125112Acidithiobacillus ferrivorans SS3 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_021064:79309879309881390220805Propionibacterium avidum 44067, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014815:3272791*3272791329485822068Micromonospora sp. L5 chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_014377:210888*21088823415323266Thermosediminibacter oceani DSM 16646 chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_014210:14403614403616380119766Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,6e-0661.9BLASTN svgBLASTP svg
NC_013729:2157785*2157785219409936315Kribbella flavida DSM 17836, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_013595:81621818162181819649034310Streptosporangium roseum DSM 43021, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_011138:3182807*3182807321165528849Alteromonas macleodii 'Deep ecotype', complete genome6e-0661.9BLASTN svgBLASTP svg
NC_003901:27273612727361275071423354Methanosarcina mazei Go1, complete genome6e-0661.9BLASTN svgBLASTP svg