Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:5399715 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
539818053997181539anthranilate synthase component IQuickGO ontologyBLASTP
53997155400113399Phosphoribosyl-AMP cyclohydrolase PRA-CHQuickGO ontologyBLASTP
540011054020921983putative lipid transport protein flippase ABC superfamily membrane N-terminal atp_bind C-terminalQuickGO ontologyBLASTP
540208954040741986Putative ABC-transport proteinQuickGO ontologyBLASTP
54041215404867747imidazole glycerol phosphate synthase subunit with HisHQuickGO ontologyBLASTP
54048825405619738N-5-phospho-L-ribosyl-formimino-5-amino-1- 5- phosphoribosyl-4-imidazolecarboxamide isomerase N-5-phosphoribosylanthranilate isomeraseQuickGO ontologyBLASTP
540580354070081206hypothetical protein
54079835408186204hypothetical protein
54082365408589354hypothetical protein putative Acyl-CoA N-acyltransferases domainQuickGO ontology
54090345409828795hypothetical protein putative membrane proteinQuickGO ontologyBLASTP
540982354111211299hypothetical proteinBLASTP
54111085411452345hypothetical protein
54114575411756300hypothetical proteinBLASTP
54117125411927216hypothetical protein
541186654129421077Putative HTH-type transcriptional regulatorQuickGO ontologyBLASTP
54129395413265327hypothetical protein
54135085413762255hypothetical proteinBLASTP
54137595414145387hypothetical proteinBLASTP
541414254155571416hypothetical proteinBLASTP
541574554181652421Restriction enzyme subunit M methylationQuickGO ontologyBLASTP
541809254194231332Type I restriction-modification system S subunitQuickGO ontologyBLASTP
541938754227523366Type I restriction-modification system R subunitQuickGO ontologyBLASTP