Pre_GI: BLASTN Hits

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Query: NC_013929:2375613 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 2375613, End: 2463888, Length: 88276

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018750:63158026315802633862022819Streptomyces venezuelae ATCC 10712, complete genome03969BLASTN svgBLASTP svg
NC_003888:65680006568000659069022691Streptomyces coelicolor A3(2), complete genome03759BLASTN svgBLASTP svg
NC_010572:17486681748668176920720540Streptomyces griseus subsp. griseus NBRC 13350, complete genome03626BLASTN svgBLASTP svg
NC_021177:66626686662668668358820921Streptomyces fulvissimus DSM 40593, complete genome03602BLASTN svgBLASTP svg
NC_015953:58657335865733590682141089Streptomyces sp. SirexAA-E chromosome, complete genome03505BLASTN svgBLASTP svg
NC_003155:27304692730469275024819780Streptomyces avermitilis MA-4680, complete genome02627BLASTN svgBLASTP svg
NC_015953:59084675908467592977521309Streptomyces sp. SirexAA-E chromosome, complete genome01986BLASTN svgBLASTP svg
NC_021177:3627947*3627947364778419838Streptomyces fulvissimus DSM 40593, complete genome0696BLASTN svgBLASTP svg
NC_013131:10370765*103707651039309922335Catenulispora acidiphila DSM 44928, complete genome1e-91347BLASTN svgBLASTP svg
NC_003888:5042283*5042283508756145279Streptomyces coelicolor A3(2), complete genome2e-71280BLASTN svgBLASTP svg
NC_019673:8161242*8161242818734226101Saccharothrix espanaensis DSM 44229 complete genome8e-56228BLASTN svgBLASTP svg
NC_013440:91465629146562916950022939Haliangium ochraceum DSM 14365, complete genome2e-53220BLASTN svgBLASTP svg
NC_015434:3755560*3755560378375828199Verrucosispora maris AB-18-032 chromosome, complete genome3e-40176BLASTN svgBLASTP svg
NC_013947:33471743347174338411536942Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-35161BLASTN svgBLASTP svg
NC_007005:40623114062311408347221162Pseudomonas syringae pv. syringae B728a, complete genome1e-32151BLASTN svgBLASTP svg
NC_015957:27557092755709278074725039Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-29141BLASTN svgBLASTP svg
NC_004578:21859072185907220851022604Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-27133BLASTN svgBLASTP svg
NC_015953:2349503*2349503238809938597Streptomyces sp. SirexAA-E chromosome, complete genome1e-26131BLASTN svgBLASTP svg
NC_012721:979656979656100222522570Burkholderia glumae BGR1 chromosome 2, complete genome8e-25125BLASTN svgBLASTP svg
NC_010572:18850018850021341824919Streptomyces griseus subsp. griseus NBRC 13350, complete genome5e-23119BLASTN svgBLASTP svg
NC_014221:16999616999619527425279Truepera radiovictrix DSM 17093 chromosome, complete genome2e-22117BLASTN svgBLASTP svg
NC_008025:17687561768756179085022095Deinococcus geothermalis DSM 11300, complete genome2e-22117BLASTN svgBLASTP svg
NC_015588:12138731213873125011736245Isoptericola variabilis 225 chromosome, complete genome8e-22115BLASTN svgBLASTP svg
NC_014659:17311211731121175858327463Rhodococcus equi 103S, complete genome8e-22115BLASTN svgBLASTP svg
NC_013757:38974133897413393181534403Geodermatophilus obscurus DSM 43160, complete genome5e-20109BLASTN svgBLASTP svg
NC_014218:88211888211890872426607Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome5e-20109BLASTN svgBLASTP svg
NC_015683:12707821270782129415323372Corynebacterium ulcerans BR-AD22 chromosome, complete genome5e-20109BLASTN svgBLASTP svg
NC_014329:11696741169674119345823785Corynebacterium pseudotuberculosis FRC41 chromosome, complete2e-19107BLASTN svgBLASTP svg
NC_015576:61216461216467488062717Mycobacterium sp. JDM601 chromosome, complete genome8e-19105BLASTN svgBLASTP svg
NC_013739:5705325*5705325573909933775Conexibacter woesei DSM 14684, complete genome8e-19105BLASTN svgBLASTP svg
NC_013131:7401253*7401253742304021788Catenulispora acidiphila DSM 44928, complete genome8e-19105BLASTN svgBLASTP svg
NC_007760:2175992*2175992219609920108Anaeromyxobacter dehalogenans 2CP-C, complete genome1e-17101BLASTN svgBLASTP svg
NC_013521:16193941619394164259923206Sanguibacter keddieii DSM 10542, complete genome1e-17101BLASTN svgBLASTP svg
NC_019673:67784016778401680115922759Saccharothrix espanaensis DSM 44229 complete genome1e-17101BLASTN svgBLASTP svg
NC_013131:63294386329438635948930052Catenulispora acidiphila DSM 44928, complete genome5e-1799.6BLASTN svgBLASTP svg
NC_007626:3996000*3996000401964723648Magnetospirillum magneticum AMB-1, complete genome5e-1799.6BLASTN svgBLASTP svg
NC_014246:1991093*1991093201986028768Mobiluncus curtisii ATCC 43063 chromosome, complete genome7e-1695.6BLASTN svgBLASTP svg
NC_004369:30826913082691310589623206Corynebacterium efficiens YS-314, complete genome7e-1695.6BLASTN svgBLASTP svg
NC_008278:6854759*6854759688205327295Frankia alni ACN14a, complete genome1e-1491.7BLASTN svgBLASTP svg
NC_018750:43330644333064436046827405Streptomyces venezuelae ATCC 10712, complete genome7e-1385.7BLASTN svgBLASTP svg
NC_012721:24068742406874243009923226Burkholderia glumae BGR1 chromosome 2, complete genome7e-1385.7BLASTN svgBLASTP svg
NC_016002:25345162534516255550820993Pseudogulbenkiania sp. NH8B, complete genome3e-1283.8BLASTN svgBLASTP svg
NC_018750:2696000*2696000271359917600Streptomyces venezuelae ATCC 10712, complete genome2e-1077.8BLASTN svgBLASTP svg
NC_003888:56225562259004333819Streptomyces coelicolor A3(2), complete genome2e-1077.8BLASTN svgBLASTP svg
NC_013947:2113941*2113941214484730907Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_013441:382597*38259742422241626Gordonia bronchialis DSM 43247, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_007677:77116877116883459963432Salinibacter ruber DSM 13855, complete genome3e-0973.8BLASTN svgBLASTP svg
NC_002935:1237585*1237585131159974015Corynebacterium diphtheriae NCTC 13129, complete genome1e-0871.9BLASTN svgBLASTP svg
NC_008146:86131986131994414682828Mycobacterium sp. MCS, complete genome1e-0871.9BLASTN svgBLASTP svg
NC_008705:86862386862395099082368Mycobacterium sp. KMS, complete genome1e-0871.9BLASTN svgBLASTP svg
NC_015312:5876957*5876957590027923323Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-0871.9BLASTN svgBLASTP svg
NC_013510:3117837*3117837315092333087Thermomonospora curvata DSM 43183, complete genome4e-0869.9BLASTN svgBLASTP svg
NC_014394:933449334411691423571Gallionella capsiferriformans ES-2 chromosome, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_014315:14352431435243145679721555Nitrosococcus watsoni C-113 chromosome, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_013715:1376985*1376985140051523531Rothia mucilaginosa DY-18, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_009921:3098271*3098271316510166831Frankia sp. EAN1pec, complete genome2e-0767.9BLASTN svgBLASTP svg
NC_008687:22994122994125509925159Paracoccus denitrificans PD1222 chromosome 2, complete sequence2e-0767.9BLASTN svgBLASTP svg
NC_003888:2814360*2814360285868544326Streptomyces coelicolor A3(2), complete genome7e-0765.9BLASTN svgBLASTP svg
NC_014210:27477872747787277340525619Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,7e-0765.9BLASTN svgBLASTP svg
NC_021150:2348214*2348214238327335060Azotobacter vinelandii CA6, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_015410:2351464*2351464238751136048Pseudomonas mendocina NK-01 chromosome, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_013222:72138472138474880827425Robiginitalea biformata HTCC2501, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_012560:2348202*2348202238326135060Azotobacter vinelandii DJ, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_007512:14596851459685148211322429Pelodictyon luteolum DSM 273, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_004578:4204235*4204235422545421220Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-0663.9BLASTN svgBLASTP svg
NC_004129:4596040*4596040462128225243Pseudomonas fluorescens Pf-5, complete genome3e-0663.9BLASTN svgBLASTP svg